Cluster: CGMR099005_CGC33
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR099005
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_4755 | k141_4755_70 | 67101 | 68999 | - | 3.A.1.210.3 |
| TF | k141_4755 | k141_4755_71 | 69002 | 69337 | - | HTH_5 |
| NULL(UNKNOWN) | k141_4755 | k141_4755_72 | 69469 | 69879 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | k141_4755 | k141_4755_73 | 69895 | 71178 | - | CBM50 |
| pfam | k141_4755 | k141_4755_74 | 71353 | 71958 | + | Lysine_decarbox | LDcluster4 |
| pfam | k141_4755 | k141_4755_75 | 71978 | 72988 | + | CorA |
| TC | k141_4755 | k141_4755_76 | 72985 | 73872 | - | 2.A.7.7.2 |
Gene ID: k141_4755_70
Type: TC
Location: 67101 - 68999 (-)
Type: TC
Location: 67101 - 68999 (-)
Gene ID: k141_4755_71
Type: TF
Location: 69002 - 69337 (-)
Type: TF
Location: 69002 - 69337 (-)
Gene ID: k141_4755_72
Type:
Location: 69469 - 69879 (-)
Type:
Location: 69469 - 69879 (-)
Gene ID: k141_4755_73
Type: CAZyme
Location: 69895 - 71178 (-)
Type: CAZyme
Location: 69895 - 71178 (-)
Gene ID: k141_4755_74
Type: pfam
Location: 71353 - 71958 (+)
Type: pfam
Location: 71353 - 71958 (+)
Gene ID: k141_4755_75
Type: pfam
Location: 71978 - 72988 (+)
Type: pfam
Location: 71978 - 72988 (+)
Gene ID: k141_4755_76
Type: TC
Location: 72985 - 73872 (-)
Type: TC
Location: 72985 - 73872 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhizobiales
Family
Rhizobiaceae
Genus
Phyllobacterium
Species
Phyllobacterium calauticae
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.