dbCAN Logo

Cluster: CGMR099005_CGC29

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_5122 k141_5122_312 338533 339558 + GH3
TC k141_5122 k141_5122_313 339592 341244 + 3.A.1.5.29
TC k141_5122 k141_5122_314 341300 342277 + 3.A.1.5.16
TC k141_5122 k141_5122_315 342281 343171 + 3.A.1.5.14
TC k141_5122 k141_5122_316 343168 343983 + 3.A.1.5.2
TC k141_5122 k141_5122_317 343980 344906 + 3.A.1.5.8
TF k141_5122 k141_5122_318 345043 345945 + AraC_N | HTH_AraC
TC k141_5122 k141_5122_319 345949 347025 - 3.A.1.1.30
STP k141_5122 k141_5122_320 347022 347957 - PfkB
STP k141_5122 k141_5122_321 347962 348978 - SIS
TC k141_5122 k141_5122_322 348981 349826 - 3.A.1.1.17
TC k141_5122 k141_5122_323 349826 350707 - 3.A.1.1.7
TC k141_5122 k141_5122_324 350923 352161 - 3.A.1.1.41
Gene ID: k141_5122_312
Type: CAZyme
Location: 338533 - 339558 (+)
Gene ID: k141_5122_313
Type: TC
Location: 339592 - 341244 (+)
Gene ID: k141_5122_314
Type: TC
Location: 341300 - 342277 (+)
Gene ID: k141_5122_315
Type: TC
Location: 342281 - 343171 (+)
Gene ID: k141_5122_316
Type: TC
Location: 343168 - 343983 (+)
Gene ID: k141_5122_317
Type: TC
Location: 343980 - 344906 (+)
Gene ID: k141_5122_318
Type: TF
Location: 345043 - 345945 (+)
Gene ID: k141_5122_319
Type: TC
Location: 345949 - 347025 (-)
Gene ID: k141_5122_320
Type: STP
Location: 347022 - 347957 (-)
Gene ID: k141_5122_321
Type: STP
Location: 347962 - 348978 (-)
Gene ID: k141_5122_322
Type: TC
Location: 348981 - 349826 (-)
Gene ID: k141_5122_323
Type: TC
Location: 349826 - 350707 (-)
Gene ID: k141_5122_324
Type: TC
Location: 350923 - 352161 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List