Cluster: CGMR099005_CGC22
🧬 Cluster Details
- Gene Count: 17
- CAZyme Count: 4
- Substrate:
- Genome ID: CGMR099005
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_2859 | k141_2859_126 | 142512 | 143774 | + | 1.B.18.3.8 |
| pfam | k141_2859 | k141_2859_127 | 143884 | 144747 | + | Methyltransf_21 | V_cholerae_RfbT |
| CAZyme | k141_2859 | k141_2859_128 | 144802 | 146133 | + | GT4 |
| NULL(UNKNOWN) | k141_2859 | k141_2859_129 | 146143 | 147285 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | k141_2859 | k141_2859_130 | 147433 | 148137 | + | 1.B.4.2.3 |
| pfam | k141_2859 | k141_2859_131 | 148199 | 149392 | + | Hint_2 |
| CAZyme | k141_2859 | k141_2859_132 | 149550 | 151871 | + | GT4 |
| NULL(UNKNOWN) | k141_2859 | k141_2859_133 | 151849 | 152829 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| STP | k141_2859 | k141_2859_134 | 152826 | 153665 | + | TPR_1 |
| TC | k141_2859 | k141_2859_135 | 153696 | 154769 | - | 8.A.4.2.1 |
| TC | k141_2859 | k141_2859_136 | 155032 | 155841 | + | 3.A.1.101.3 |
| pfam | k141_2859 | k141_2859_137 | 155895 | 156653 | + | Methyltransf_4 | Methyltransf_11 | Methyltransf_12 | Methyltransf_23 | Methyltransf_25 | Methyltransf_31 |
| TC | k141_2859 | k141_2859_138 | 156671 | 157417 | - | 3.A.1.101.3 |
| TC | k141_2859 | k141_2859_139 | 157414 | 158616 | - | 8.A.4.2.1 |
| TC | k141_2859 | k141_2859_140 | 159094 | 160341 | + | 9.A.41.1.1 |
| CAZyme | k141_2859 | k141_2859_141 | 160338 | 162461 | + | GT107 | GT107 |
| CAZyme | k141_2859 | k141_2859_142 | 162458 | 163723 | + | GT4 |
Gene ID: k141_2859_126
Type: TC
Location: 142512 - 143774 (+)
Type: TC
Location: 142512 - 143774 (+)
Gene ID: k141_2859_127
Type: pfam
Location: 143884 - 144747 (+)
Type: pfam
Location: 143884 - 144747 (+)
Gene ID: k141_2859_128
Type: CAZyme
Location: 144802 - 146133 (+)
Type: CAZyme
Location: 144802 - 146133 (+)
Gene ID: k141_2859_129
Type:
Location: 146143 - 147285 (+)
Type:
Location: 146143 - 147285 (+)
Gene ID: k141_2859_130
Type: TC
Location: 147433 - 148137 (+)
Type: TC
Location: 147433 - 148137 (+)
Gene ID: k141_2859_131
Type: pfam
Location: 148199 - 149392 (+)
Type: pfam
Location: 148199 - 149392 (+)
Gene ID: k141_2859_132
Type: CAZyme
Location: 149550 - 151871 (+)
Type: CAZyme
Location: 149550 - 151871 (+)
Gene ID: k141_2859_133
Type:
Location: 151849 - 152829 (+)
Type:
Location: 151849 - 152829 (+)
Gene ID: k141_2859_134
Type: STP
Location: 152826 - 153665 (+)
Type: STP
Location: 152826 - 153665 (+)
Gene ID: k141_2859_135
Type: TC
Location: 153696 - 154769 (-)
Type: TC
Location: 153696 - 154769 (-)
Gene ID: k141_2859_136
Type: TC
Location: 155032 - 155841 (+)
Type: TC
Location: 155032 - 155841 (+)
Gene ID: k141_2859_137
Type: pfam
Location: 155895 - 156653 (+)
Type: pfam
Location: 155895 - 156653 (+)
Gene ID: k141_2859_138
Type: TC
Location: 156671 - 157417 (-)
Type: TC
Location: 156671 - 157417 (-)
Gene ID: k141_2859_139
Type: TC
Location: 157414 - 158616 (-)
Type: TC
Location: 157414 - 158616 (-)
Gene ID: k141_2859_140
Type: TC
Location: 159094 - 160341 (+)
Type: TC
Location: 159094 - 160341 (+)
Gene ID: k141_2859_141
Type: CAZyme
Location: 160338 - 162461 (+)
Type: CAZyme
Location: 160338 - 162461 (+)
Gene ID: k141_2859_142
Type: CAZyme
Location: 162458 - 163723 (+)
Type: CAZyme
Location: 162458 - 163723 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhizobiales
Family
Rhizobiaceae
Genus
Phyllobacterium
Species
Phyllobacterium calauticae
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.