Cluster: CGMR098962_CGC49
🧬 Cluster Details
- Gene Count: 17
- CAZyme Count: 7
- Substrate:
- Genome ID: CGMR098962
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_361192 | k141_361192_1 | 713 | 2656 | + | GH127 |
| TC | k141_361192 | k141_361192_2 | 2704 | 4107 | + | 3.A.1.1.34 |
| TC | k141_361192 | k141_361192_3 | 4209 | 5120 | + | 3.A.1.1.34 |
| TC | k141_361192 | k141_361192_4 | 5124 | 5984 | + | 3.A.1.1.34 |
| CAZyme | k141_361192 | k141_361192_5 | 6092 | 7606 | + | GH51_1 |
| TF | k141_361192 | k141_361192_6 | 7672 | 8721 | + | LacI |
| pfam | k141_361192 | k141_361192_7 | 9013 | 10173 | + | Fe-ADH | Fe-ADH_2 | ADH_Fe_C |
| TC | k141_361192 | k141_361192_8 | 10678 | 12069 | + | 9.B.18.1.2 |
| pfam | k141_361192 | k141_361192_9 | 12108 | 13586 | + | LytR_cpsA_psr |
| pfam | k141_361192 | k141_361192_10 | 13761 | 14303 | + | KOW | NusG |
| CAZyme | k141_361192 | k141_361192_11 | 14263 | 15162 | + | GT4 |
| CAZyme | k141_361192 | k141_361192_12 | 15440 | 16591 | + | GT2 |
| pfam | k141_361192 | k141_361192_13 | 16649 | 17818 | + | PS_pyruv_trans |
| CAZyme | k141_361192 | k141_361192_14 | 17831 | 18970 | + | GT4 |
| NULL(UNKNOWN) | k141_361192 | k141_361192_15 | 18989 | 20191 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | k141_361192 | k141_361192_16 | 20181 | 21332 | + | GT4 |
| CAZyme | k141_361192 | k141_361192_17 | 21396 | 22610 | + | GT9 |
Gene ID: k141_361192_1
Type: CAZyme
Location: 713 - 2656 (+)
Type: CAZyme
Location: 713 - 2656 (+)
Gene ID: k141_361192_2
Type: TC
Location: 2704 - 4107 (+)
Type: TC
Location: 2704 - 4107 (+)
Gene ID: k141_361192_3
Type: TC
Location: 4209 - 5120 (+)
Type: TC
Location: 4209 - 5120 (+)
Gene ID: k141_361192_4
Type: TC
Location: 5124 - 5984 (+)
Type: TC
Location: 5124 - 5984 (+)
Gene ID: k141_361192_5
Type: CAZyme
Location: 6092 - 7606 (+)
Type: CAZyme
Location: 6092 - 7606 (+)
Gene ID: k141_361192_6
Type: TF
Location: 7672 - 8721 (+)
Type: TF
Location: 7672 - 8721 (+)
Gene ID: k141_361192_7
Type: pfam
Location: 9013 - 10173 (+)
Type: pfam
Location: 9013 - 10173 (+)
Gene ID: k141_361192_8
Type: TC
Location: 10678 - 12069 (+)
Type: TC
Location: 10678 - 12069 (+)
Gene ID: k141_361192_9
Type: pfam
Location: 12108 - 13586 (+)
Type: pfam
Location: 12108 - 13586 (+)
Gene ID: k141_361192_10
Type: pfam
Location: 13761 - 14303 (+)
Type: pfam
Location: 13761 - 14303 (+)
Gene ID: k141_361192_11
Type: CAZyme
Location: 14263 - 15162 (+)
Type: CAZyme
Location: 14263 - 15162 (+)
Gene ID: k141_361192_12
Type: CAZyme
Location: 15440 - 16591 (+)
Type: CAZyme
Location: 15440 - 16591 (+)
Gene ID: k141_361192_13
Type: pfam
Location: 16649 - 17818 (+)
Type: pfam
Location: 16649 - 17818 (+)
Gene ID: k141_361192_14
Type: CAZyme
Location: 17831 - 18970 (+)
Type: CAZyme
Location: 17831 - 18970 (+)
Gene ID: k141_361192_15
Type:
Location: 18989 - 20191 (+)
Type:
Location: 18989 - 20191 (+)
Gene ID: k141_361192_16
Type: CAZyme
Location: 20181 - 21332 (+)
Type: CAZyme
Location: 20181 - 21332 (+)
Gene ID: k141_361192_17
Type: CAZyme
Location: 21396 - 22610 (+)
Type: CAZyme
Location: 21396 - 22610 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
KM106-2
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.