Cluster: CGMR098962_CGC46
🧬 Cluster Details
- Gene Count: 14
- CAZyme Count: 5
- Substrate:
- Genome ID: CGMR098962
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_123568 | k141_123568_6 | 6299 | 8083 | - | CE12 |
| TF | k141_123568 | k141_123568_7 | 8273 | 10588 | + | HTH_AraC |
| TC | k141_123568 | k141_123568_8 | 10897 | 11883 | + | 3.A.1.1.10 |
| TC | k141_123568 | k141_123568_9 | 11900 | 12820 | + | 3.A.1.1.10 |
| NULL(UNKNOWN) | k141_123568 | k141_123568_10 | 12887 | 14560 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | k141_123568 | k141_123568_11 | 14691 | 15716 | + | GH105 |
| CAZyme | k141_123568 | k141_123568_12 | 15734 | 17878 | + | GH112 |
| CAZyme | k141_123568 | k141_123568_13 | 17905 | 19404 | + | GH51_1 |
| pfam | k141_123568 | k141_123568_14 | 19418 | 19675 | + | DUF6171 |
| CAZyme | k141_123568 | k141_123568_15 | 19764 | 26552 | + | CBM2 | CE12 | PL11 |
| TC | k141_123568 | k141_123568_16 | 26773 | 27432 | + | 3.A.1.3.2 |
| TC | k141_123568 | k141_123568_17 | 27413 | 28093 | + | 3.A.1.3.16 |
| TC | k141_123568 | k141_123568_18 | 28115 | 28906 | + | 3.A.1.3.15 |
| TC | k141_123568 | k141_123568_19 | 28925 | 29791 | + | 3.A.1.3.10 |
Gene ID: k141_123568_6
Type: CAZyme
Location: 6299 - 8083 (-)
Type: CAZyme
Location: 6299 - 8083 (-)
Gene ID: k141_123568_7
Type: TF
Location: 8273 - 10588 (+)
Type: TF
Location: 8273 - 10588 (+)
Gene ID: k141_123568_8
Type: TC
Location: 10897 - 11883 (+)
Type: TC
Location: 10897 - 11883 (+)
Gene ID: k141_123568_9
Type: TC
Location: 11900 - 12820 (+)
Type: TC
Location: 11900 - 12820 (+)
Gene ID: k141_123568_10
Type:
Location: 12887 - 14560 (+)
Type:
Location: 12887 - 14560 (+)
Gene ID: k141_123568_11
Type: CAZyme
Location: 14691 - 15716 (+)
Type: CAZyme
Location: 14691 - 15716 (+)
Gene ID: k141_123568_12
Type: CAZyme
Location: 15734 - 17878 (+)
Type: CAZyme
Location: 15734 - 17878 (+)
Gene ID: k141_123568_13
Type: CAZyme
Location: 17905 - 19404 (+)
Type: CAZyme
Location: 17905 - 19404 (+)
Gene ID: k141_123568_14
Type: pfam
Location: 19418 - 19675 (+)
Type: pfam
Location: 19418 - 19675 (+)
Gene ID: k141_123568_15
Type: CAZyme
Location: 19764 - 26552 (+)
Type: CAZyme
Location: 19764 - 26552 (+)
Gene ID: k141_123568_16
Type: TC
Location: 26773 - 27432 (+)
Type: TC
Location: 26773 - 27432 (+)
Gene ID: k141_123568_17
Type: TC
Location: 27413 - 28093 (+)
Type: TC
Location: 27413 - 28093 (+)
Gene ID: k141_123568_18
Type: TC
Location: 28115 - 28906 (+)
Type: TC
Location: 28115 - 28906 (+)
Gene ID: k141_123568_19
Type: TC
Location: 28925 - 29791 (+)
Type: TC
Location: 28925 - 29791 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
KM106-2
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.