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Cluster: CGMR098689_CGC46

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_8608 k141_8608_60 57136 58296 + 3.A.1.11.8
TC k141_8608 k141_8608_61 58289 59104 + 3.A.1.11.7
TC k141_8608 k141_8608_62 59104 61023 + 3.A.1.11.7
pfam k141_8608 k141_8608_63 61045 61383 + DUF1622
pfam k141_8608 k141_8608_64 61370 62278 + Amidohydro_2
CAZyme k141_8608 k141_8608_65 62349 63482 - GH88
TC k141_8608 k141_8608_66 63503 64396 - 3.A.1.1.10
TC k141_8608 k141_8608_67 64407 65354 - 3.A.1.1.10
TC k141_8608 k141_8608_68 65434 67119 - 3.A.1.1.10
CAZyme k141_8608 k141_8608_69 67147 69129 - PL12
TF k141_8608 k141_8608_70 69290 71560 - 0035607
CAZyme k141_8608 k141_8608_71 71702 72841 - CE9
CAZyme k141_8608 k141_8608_72 73088 78769 + PL8
TC k141_8608 k141_8608_73 78922 80574 - 3.A.18.1.1
pfam k141_8608 k141_8608_74 80866 81699 + BacA
TC k141_8608 k141_8608_75 81770 83404 - 3.A.1.121.4
TC k141_8608 k141_8608_76 83728 84492 - 3.A.1.3.10
TC k141_8608 k141_8608_77 84503 85156 - 3.A.1.3.15
TC k141_8608 k141_8608_78 85178 86050 - 3.A.1.3.28
Gene ID: k141_8608_60
Type: TC
Location: 57136 - 58296 (+)
Gene ID: k141_8608_61
Type: TC
Location: 58289 - 59104 (+)
Gene ID: k141_8608_62
Type: TC
Location: 59104 - 61023 (+)
Gene ID: k141_8608_63
Type: pfam
Location: 61045 - 61383 (+)
Gene ID: k141_8608_64
Type: pfam
Location: 61370 - 62278 (+)
Gene ID: k141_8608_65
Type: CAZyme
Location: 62349 - 63482 (-)
Gene ID: k141_8608_66
Type: TC
Location: 63503 - 64396 (-)
Gene ID: k141_8608_67
Type: TC
Location: 64407 - 65354 (-)
Gene ID: k141_8608_68
Type: TC
Location: 65434 - 67119 (-)
Gene ID: k141_8608_69
Type: CAZyme
Location: 67147 - 69129 (-)
Gene ID: k141_8608_70
Type: TF
Location: 69290 - 71560 (-)
Gene ID: k141_8608_71
Type: CAZyme
Location: 71702 - 72841 (-)
Gene ID: k141_8608_72
Type: CAZyme
Location: 73088 - 78769 (+)
Gene ID: k141_8608_73
Type: TC
Location: 78922 - 80574 (-)
Gene ID: k141_8608_74
Type: pfam
Location: 80866 - 81699 (+)
Gene ID: k141_8608_75
Type: TC
Location: 81770 - 83404 (-)
Gene ID: k141_8608_76
Type: TC
Location: 83728 - 84492 (-)
Gene ID: k141_8608_77
Type: TC
Location: 84503 - 85156 (-)
Gene ID: k141_8608_78
Type: TC
Location: 85178 - 86050 (-)

Taxonomic Lineage

Domain
Bacteria

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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