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Cluster: CGMR098689_CGC3

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_19508 k141_19508_68 77583 80024 - GH3
TC k141_19508 k141_19508_69 80107 80955 - 3.A.1.1.2
TC k141_19508 k141_19508_70 80955 81911 - 3.A.1.1.4
NULL(UNKNOWN) k141_19508 k141_19508_71 82002 83381 - NULL(UNKNOWN)
[View Structural Homologs]
TF k141_19508 k141_19508_72 83523 84263 + HTH_AraC | HTH_AraC
CAZyme k141_19508 k141_19508_73 84368 87067 - GH94
CAZyme k141_19508 k141_19508_74 87090 89504 - GH94
pfam k141_19508 k141_19508_75 89770 90084 - HTH_36
pfam k141_19508 k141_19508_76 90231 90578 - TnpV
CAZyme k141_19508 k141_19508_77 90837 91799 - GH5_25
Gene ID: k141_19508_68
Type: CAZyme
Location: 77583 - 80024 (-)
Gene ID: k141_19508_69
Type: TC
Location: 80107 - 80955 (-)
Gene ID: k141_19508_70
Type: TC
Location: 80955 - 81911 (-)
Gene ID: k141_19508_71
Type:
Location: 82002 - 83381 (-)
Gene ID: k141_19508_72
Type: TF
Location: 83523 - 84263 (+)
Gene ID: k141_19508_73
Type: CAZyme
Location: 84368 - 87067 (-)
Gene ID: k141_19508_74
Type: CAZyme
Location: 87090 - 89504 (-)
Gene ID: k141_19508_75
Type: pfam
Location: 89770 - 90084 (-)
Gene ID: k141_19508_76
Type: pfam
Location: 90231 - 90578 (-)
Gene ID: k141_19508_77
Type: CAZyme
Location: 90837 - 91799 (-)

Taxonomic Lineage

Domain
Bacteria

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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