Cluster: CGMR098330_CGC28
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: CGMR098330
- CGC Family ID: CGCFAM_00015
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_168498 | k141_168498_3 | 2643 | 4430 | + | GT2 |
| pfam | k141_168498 | k141_168498_4 | 4417 | 5661 | + | Acyl_transf_3 | OpgC_C |
| NULL(UNKNOWN) | k141_168498 | k141_168498_5 | 5904 | 6371 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | k141_168498 | k141_168498_6 | 6489 | 7460 | + | GT4 |
| NULL(UNKNOWN) | k141_168498 | k141_168498_7 | 7388 | 7669 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | k141_168498 | k141_168498_8 | 7931 | 8680 | - | 1.A.14.2.2 |
Gene ID: k141_168498_3
Type: CAZyme
Location: 2643 - 4430 (+)
Type: CAZyme
Location: 2643 - 4430 (+)
Gene ID: k141_168498_4
Type: pfam
Location: 4417 - 5661 (+)
Type: pfam
Location: 4417 - 5661 (+)
Gene ID: k141_168498_5
Type:
Location: 5904 - 6371 (+)
Type:
Location: 5904 - 6371 (+)
Gene ID: k141_168498_6
Type: CAZyme
Location: 6489 - 7460 (+)
Type: CAZyme
Location: 6489 - 7460 (+)
Gene ID: k141_168498_7
Type:
Location: 7388 - 7669 (-)
Type:
Location: 7388 - 7669 (-)
Gene ID: k141_168498_8
Type: TC
Location: 7931 - 8680 (-)
Type: TC
Location: 7931 - 8680 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Rhodobacteraceae
Genus
Pontibaca
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.