Cluster: CGMR098330_CGC17
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR098330
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_176298 | k141_176298_21 | 18817 | 19416 | + | 2.A.75.1.4 |
| STP | k141_176298 | k141_176298_22 | 19483 | 20052 | + | TetR_N |
| sulfatase | k141_176298 | k141_176298_23 | 20049 | 21557 | + | S1_12 |
| CAZyme | k141_176298 | k141_176298_24 | 21635 | 23311 | + | AA3_2 |
| TF | k141_176298 | k141_176298_25 | 23320 | 24714 | - | HTH_3 |
| TC | k141_176298 | k141_176298_26 | 24780 | 25988 | - | 2.A.1.2.9 |
| TC | k141_176298 | k141_176298_27 | 26160 | 27692 | + | 3.B.1.1.2 |
Gene ID: k141_176298_21
Type: TC
Location: 18817 - 19416 (+)
Type: TC
Location: 18817 - 19416 (+)
Gene ID: k141_176298_22
Type: STP
Location: 19483 - 20052 (+)
Type: STP
Location: 19483 - 20052 (+)
Gene ID: k141_176298_23
Type: sulfatase
Location: 20049 - 21557 (+)
Type: sulfatase
Location: 20049 - 21557 (+)
Gene ID: k141_176298_24
Type: CAZyme
Location: 21635 - 23311 (+)
Type: CAZyme
Location: 21635 - 23311 (+)
Gene ID: k141_176298_25
Type: TF
Location: 23320 - 24714 (-)
Type: TF
Location: 23320 - 24714 (-)
Gene ID: k141_176298_26
Type: TC
Location: 24780 - 25988 (-)
Type: TC
Location: 24780 - 25988 (-)
Gene ID: k141_176298_27
Type: TC
Location: 26160 - 27692 (+)
Type: TC
Location: 26160 - 27692 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Rhodobacteraceae
Genus
Pontibaca
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.