Cluster: CGMR098249_CGC16
🧬 Cluster Details
- Gene Count: 12
- CAZyme Count: 6
- Substrate:
- Genome ID: CGMR098249
- CGC Family ID: CGCFAM_00003
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_953939 | k141_953939_17 | 21816 | 23213 | - | GH4 |
| TF | k141_953939 | k141_953939_18 | 23363 | 24151 | + | HTH_AraC |
| TC | k141_953939 | k141_953939_19 | 24234 | 24845 | + | 9.B.18.1.1 |
| pfam | k141_953939 | k141_953939_20 | 24842 | 25672 | + | 3Beta_HSD | Epimerase | Polysacc_synt_2 | RmlD_sub_bind | NAD_binding_4 | NAD_binding_10 | GDP_Man_Dehyd |
| CAZyme | k141_953939 | k141_953939_21 | 25674 | 26489 | + | GT2 |
| CAZyme | k141_953939 | k141_953939_22 | 26501 | 27466 | + | GT2 |
| CAZyme | k141_953939 | k141_953939_23 | 27516 | 28643 | + | GT4 |
| pfam | k141_953939 | k141_953939_24 | 28832 | 29353 | + | Hexapep | Hexapep_2 |
| pfam | k141_953939 | k141_953939_25 | 29364 | 30773 | + | O-ag_pol_Wzy |
| CAZyme | k141_953939 | k141_953939_26 | 30775 | 31767 | + | GT2 |
| CAZyme | k141_953939 | k141_953939_27 | 31770 | 32711 | + | GT2 |
| TC | k141_953939 | k141_953939_28 | 32726 | 33373 | + | 2.A.66.2.2 |
Gene ID: k141_953939_17
Type: CAZyme
Location: 21816 - 23213 (-)
Type: CAZyme
Location: 21816 - 23213 (-)
Gene ID: k141_953939_18
Type: TF
Location: 23363 - 24151 (+)
Type: TF
Location: 23363 - 24151 (+)
Gene ID: k141_953939_19
Type: TC
Location: 24234 - 24845 (+)
Type: TC
Location: 24234 - 24845 (+)
Gene ID: k141_953939_20
Type: pfam
Location: 24842 - 25672 (+)
Type: pfam
Location: 24842 - 25672 (+)
Gene ID: k141_953939_21
Type: CAZyme
Location: 25674 - 26489 (+)
Type: CAZyme
Location: 25674 - 26489 (+)
Gene ID: k141_953939_22
Type: CAZyme
Location: 26501 - 27466 (+)
Type: CAZyme
Location: 26501 - 27466 (+)
Gene ID: k141_953939_23
Type: CAZyme
Location: 27516 - 28643 (+)
Type: CAZyme
Location: 27516 - 28643 (+)
Gene ID: k141_953939_24
Type: pfam
Location: 28832 - 29353 (+)
Type: pfam
Location: 28832 - 29353 (+)
Gene ID: k141_953939_25
Type: pfam
Location: 29364 - 30773 (+)
Type: pfam
Location: 29364 - 30773 (+)
Gene ID: k141_953939_26
Type: CAZyme
Location: 30775 - 31767 (+)
Type: CAZyme
Location: 30775 - 31767 (+)
Gene ID: k141_953939_27
Type: CAZyme
Location: 31770 - 32711 (+)
Type: CAZyme
Location: 31770 - 32711 (+)
Gene ID: k141_953939_28
Type: TC
Location: 32726 - 33373 (+)
Type: TC
Location: 32726 - 33373 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Monoglobales
Family
Firm-18
Genus
CAJLYO01
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.