Cluster: CGMR098246_CGC16
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate: galactan/pectin/host glycan
- Genome ID: CGMR098246
- CGC Family ID: CGCFAM_00485
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_126996 | k141_126996_1 | 2 | 1255 | - | GH92 |
| pfam | k141_126996 | k141_126996_2 | 1321 | 2223 | - | GDPD |
| pfam | k141_126996 | k141_126996_3 | 2332 | 3897 | - | SusD_RagB | SusD-like_3 |
| TC | k141_126996 | k141_126996_4 | 3931 | 7362 | - | 1.B.14.6.1 |
| STP | k141_126996 | k141_126996_5 | 7536 | 8537 | - | FecR |
| TF | k141_126996 | k141_126996_6 | 8647 | 9225 | - | GerE |
| TC | k141_126996 | k141_126996_7 | 9633 | 11084 | + | 2.A.1.7.1 |
Gene ID: k141_126996_1
Type: CAZyme
Location: 2 - 1255 (-)
Type: CAZyme
Location: 2 - 1255 (-)
Gene ID: k141_126996_2
Type: pfam
Location: 1321 - 2223 (-)
Type: pfam
Location: 1321 - 2223 (-)
Gene ID: k141_126996_3
Type: pfam
Location: 2332 - 3897 (-)
Type: pfam
Location: 2332 - 3897 (-)
Gene ID: k141_126996_4
Type: TC
Location: 3931 - 7362 (-)
Type: TC
Location: 3931 - 7362 (-)
Gene ID: k141_126996_5
Type: STP
Location: 7536 - 8537 (-)
Type: STP
Location: 7536 - 8537 (-)
Gene ID: k141_126996_6
Type: TF
Location: 8647 - 9225 (-)
Type: TF
Location: 8647 - 9225 (-)
Gene ID: k141_126996_7
Type: TC
Location: 9633 - 11084 (+)
Type: TC
Location: 9633 - 11084 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
JAAYRG01
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.