Cluster: CGMR098246_CGC12
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR098246
- CGC Family ID: CGCFAM_00335
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_235630 | k141_235630_1 | 1 | 1590 | + | 3.A.11.1.3 |
| TF | k141_235630 | k141_235630_2 | 1619 | 2614 | - | LacI |
| CAZyme | k141_235630 | k141_235630_3 | 3050 | 5386 | + | GT35 |
| pfam | k141_235630 | k141_235630_4 | 5507 | 6817 | + | SBP_bac_1 | SBP_bac_8 |
| TC | k141_235630 | k141_235630_5 | 6985 | 8406 | + | 3.A.1.1.27 |
| TC | k141_235630 | k141_235630_6 | 8403 | 9245 | + | 3.A.1.1.27 |
| TC | k141_235630 | k141_235630_7 | 9246 | 9845 | + | 8.A.9.1.1 |
Gene ID: k141_235630_1
Type: TC
Location: 1 - 1590 (+)
Type: TC
Location: 1 - 1590 (+)
Gene ID: k141_235630_2
Type: TF
Location: 1619 - 2614 (-)
Type: TF
Location: 1619 - 2614 (-)
Gene ID: k141_235630_3
Type: CAZyme
Location: 3050 - 5386 (+)
Type: CAZyme
Location: 3050 - 5386 (+)
Gene ID: k141_235630_4
Type: pfam
Location: 5507 - 6817 (+)
Type: pfam
Location: 5507 - 6817 (+)
Gene ID: k141_235630_5
Type: TC
Location: 6985 - 8406 (+)
Type: TC
Location: 6985 - 8406 (+)
Gene ID: k141_235630_6
Type: TC
Location: 8403 - 9245 (+)
Type: TC
Location: 8403 - 9245 (+)
Gene ID: k141_235630_7
Type: TC
Location: 9246 - 9845 (+)
Type: TC
Location: 9246 - 9845 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
JAAYRG01
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.