Cluster: CGMR098090_CGC4
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 3
- Substrate:
- Genome ID: CGMR098090
- CGC Family ID: CGCFAM_00076
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_9227 | k141_9227_1 | 3 | 482 | + | GT4 |
| CAZyme | k141_9227 | k141_9227_2 | 485 | 3232 | + | GT66 |
| CAZyme | k141_9227 | k141_9227_3 | 3306 | 4433 | + | GT4 |
| TC | k141_9227 | k141_9227_4 | 4426 | 5031 | + | 9.B.18.1.2 |
| pfam | k141_9227 | k141_9227_5 | 5018 | 5617 | + | Hexapep | Hexapep | PglD_N |
| pfam | k141_9227 | k141_9227_6 | 5734 | 6831 | + | DegT_DnrJ_EryC1 |
| TC | k141_9227 | k141_9227_7 | 6831 | 8636 | + | 9.B.18.2.1 |
Gene ID: k141_9227_1
Type: CAZyme
Location: 3 - 482 (+)
Type: CAZyme
Location: 3 - 482 (+)
Gene ID: k141_9227_2
Type: CAZyme
Location: 485 - 3232 (+)
Type: CAZyme
Location: 485 - 3232 (+)
Gene ID: k141_9227_3
Type: CAZyme
Location: 3306 - 4433 (+)
Type: CAZyme
Location: 3306 - 4433 (+)
Gene ID: k141_9227_4
Type: TC
Location: 4426 - 5031 (+)
Type: TC
Location: 4426 - 5031 (+)
Gene ID: k141_9227_5
Type: pfam
Location: 5018 - 5617 (+)
Type: pfam
Location: 5018 - 5617 (+)
Gene ID: k141_9227_6
Type: pfam
Location: 5734 - 6831 (+)
Type: pfam
Location: 5734 - 6831 (+)
Gene ID: k141_9227_7
Type: TC
Location: 6831 - 8636 (+)
Type: TC
Location: 6831 - 8636 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Campylobacterota
Class
Campylobacteria
Order
Campylobacterales
Family
Campylobacteraceae
Genus
Campylobacter_B
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.