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Cluster: CGMR098037_CGC19

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_30561 k141_30561_43 46095 46931 + 3.A.1.15.7
pfam k141_30561 k141_30561_44 46953 47462 - ThrE_2
pfam k141_30561 k141_30561_45 47462 48256 - ThrE
CAZyme k141_30561 k141_30561_46 48615 51290 + GH77
CAZyme k141_30561 k141_30561_47 51315 53159 + GH13_46
TF k141_30561 k141_30561_48 53192 54229 + LacI
TC k141_30561 k141_30561_49 54336 55667 + 2.A.2.6.2
CAZyme k141_30561 k141_30561_50 55695 57053 + GH13
pfam k141_30561 k141_30561_51 57132 57581 - Biotin_lipoyl | GCV_H
NULL(UNKNOWN) k141_30561 k141_30561_52 57598 57774 - NULL(UNKNOWN)
[View Structural Homologs]
TC k141_30561 k141_30561_53 57796 59346 - 3.B.1.1.2
Gene ID: k141_30561_43
Type: TC
Location: 46095 - 46931 (+)
Gene ID: k141_30561_44
Type: pfam
Location: 46953 - 47462 (-)
Gene ID: k141_30561_45
Type: pfam
Location: 47462 - 48256 (-)
Gene ID: k141_30561_46
Type: CAZyme
Location: 48615 - 51290 (+)
Gene ID: k141_30561_47
Type: CAZyme
Location: 51315 - 53159 (+)
Gene ID: k141_30561_48
Type: TF
Location: 53192 - 54229 (+)
Gene ID: k141_30561_49
Type: TC
Location: 54336 - 55667 (+)
Gene ID: k141_30561_50
Type: CAZyme
Location: 55695 - 57053 (+)
Gene ID: k141_30561_51
Type: pfam
Location: 57132 - 57581 (-)
Gene ID: k141_30561_52
Type:
Location: 57598 - 57774 (-)
Gene ID: k141_30561_53
Type: TC
Location: 57796 - 59346 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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