Cluster: CGMR098002_CGC7
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR098002
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_173423 | k141_173423_5 | 3480 | 3854 | + | 1.A.43.1.13 |
| STP | k141_173423 | k141_173423_6 | 3917 | 5026 | - | Fer4 |
| NULL(UNKNOWN) | k141_173423 | k141_173423_7 | 5058 | 5570 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | k141_173423 | k141_173423_8 | 5583 | 7493 | - | 1.B.14.8.6 |
| pfam | k141_173423 | k141_173423_9 | 7490 | 7918 | - | TM1506 |
| CAZyme | k141_173423 | k141_173423_10 | 8129 | 10375 | + | GH163 |
Gene ID: k141_173423_5
Type: TC
Location: 3480 - 3854 (+)
Type: TC
Location: 3480 - 3854 (+)
Gene ID: k141_173423_6
Type: STP
Location: 3917 - 5026 (-)
Type: STP
Location: 3917 - 5026 (-)
Gene ID: k141_173423_7
Type:
Location: 5058 - 5570 (-)
Type:
Location: 5058 - 5570 (-)
Gene ID: k141_173423_8
Type: TC
Location: 5583 - 7493 (-)
Type: TC
Location: 5583 - 7493 (-)
Gene ID: k141_173423_9
Type: pfam
Location: 7490 - 7918 (-)
Type: pfam
Location: 7490 - 7918 (-)
Gene ID: k141_173423_10
Type: CAZyme
Location: 8129 - 10375 (+)
Type: CAZyme
Location: 8129 - 10375 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Species
Alistipes sp910576555
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| k141_173423_5 | vegan > omnivore | 2.86152 | 0.02500 |