Cluster: CGMR098002_CGC24
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR098002
- CGC Family ID: CGCFAM_01734
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_56883 | k141_56883_140 | 186421 | 187515 | + | CE2 |
| pfam | k141_56883 | k141_56883_141 | 187686 | 188012 | + | MazG | MazG-like |
| NULL(UNKNOWN) | k141_56883 | k141_56883_142 | 188036 | 188434 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | k141_56883 | k141_56883_143 | 188452 | 190458 | + | 2.A.67.4.2 |
Gene ID: k141_56883_140
Type: CAZyme
Location: 186421 - 187515 (+)
Type: CAZyme
Location: 186421 - 187515 (+)
Gene ID: k141_56883_141
Type: pfam
Location: 187686 - 188012 (+)
Type: pfam
Location: 187686 - 188012 (+)
Gene ID: k141_56883_142
Type:
Location: 188036 - 188434 (+)
Type:
Location: 188036 - 188434 (+)
Gene ID: k141_56883_143
Type: TC
Location: 188452 - 190458 (+)
Type: TC
Location: 188452 - 190458 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Species
Alistipes sp910576555
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| k141_56883_140 | vegan > omnivore | 1.23551 | 0.02500 |