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Cluster: CGMR098002_CGC16

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_119045 k141_119045_48 32409 35477 - 1.B.14.6.1
CAZyme k141_119045 k141_119045_49 35491 36819 - GH37
CAZyme k141_119045 k141_119045_50 36833 37957 - GH26
CAZyme k141_119045 k141_119045_51 37979 39091 - GH26
TF k141_119045 k141_119045_52 39105 39998 - HTH_AraC
pfam k141_119045 k141_119045_53 39995 41206 - GlcNAc_2-epim
TC k141_119045 k141_119045_54 41212 42648 - 2.A.2.3.4
CAZyme k141_119045 k141_119045_55 42645 43829 - GH130_1
CAZyme k141_119045 k141_119045_56 43861 45873 - GH97
Gene ID: k141_119045_48
Type: TC
Location: 32409 - 35477 (-)
Gene ID: k141_119045_49
Type: CAZyme
Location: 35491 - 36819 (-)
Gene ID: k141_119045_50
Type: CAZyme
Location: 36833 - 37957 (-)
Gene ID: k141_119045_51
Type: CAZyme
Location: 37979 - 39091 (-)
Gene ID: k141_119045_52
Type: TF
Location: 39105 - 39998 (-)
Gene ID: k141_119045_53
Type: pfam
Location: 39995 - 41206 (-)
Gene ID: k141_119045_54
Type: TC
Location: 41212 - 42648 (-)
Gene ID: k141_119045_55
Type: CAZyme
Location: 42645 - 43829 (-)
Gene ID: k141_119045_56
Type: CAZyme
Location: 43861 - 45873 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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