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Cluster: CGMR098002_CGC1

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_311001 k141_311001_3 3297 5639 + GT4
CAZyme k141_311001 k141_311001_4 5636 6655 + GT2
pfam k141_311001 k141_311001_5 6705 7769 + EpsG
CAZyme k141_311001 k141_311001_6 7775 8671 + GT2
CAZyme k141_311001 k141_311001_7 8668 9744 + GT4
CAZyme k141_311001 k141_311001_8 9776 10909 + GT4
TC k141_311001 k141_311001_9 10912 11520 + 9.B.18.1.2
CAZyme k141_311001 k141_311001_10 11529 12653 + GT4
Gene ID: k141_311001_3
Type: CAZyme
Location: 3297 - 5639 (+)
Gene ID: k141_311001_4
Type: CAZyme
Location: 5636 - 6655 (+)
Gene ID: k141_311001_5
Type: pfam
Location: 6705 - 7769 (+)
Gene ID: k141_311001_6
Type: CAZyme
Location: 7775 - 8671 (+)
Gene ID: k141_311001_7
Type: CAZyme
Location: 8668 - 9744 (+)
Gene ID: k141_311001_8
Type: CAZyme
Location: 9776 - 10909 (+)
Gene ID: k141_311001_9
Type: TC
Location: 10912 - 11520 (+)
Gene ID: k141_311001_10
Type: CAZyme
Location: 11529 - 12653 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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