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Cluster: CGMR097589_CGC6

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_244200 k141_244200_2 735 2600 + 4.A.1.2.2
pfam k141_244200 k141_244200_3 2674 3540 + PRD | PRD | CAT_RBD
CAZyme k141_244200 k141_244200_4 3542 4975 + GH1
CAZyme k141_244200 k141_244200_5 5083 5934 + GT8
TC k141_244200 k141_244200_6 5927 6634 + 9.B.20.1.4
TC k141_244200 k141_244200_7 6785 8014 + 2.A.1.15.4
TF k141_244200 k141_244200_8 8221 11031 + 0037767
TC k141_244200 k141_244200_9 11181 11675 + 4.A.6.1.16
TC k141_244200 k141_244200_10 11774 12814 + 4.A.6.1.15
TC k141_244200 k141_244200_11 12840 13640 + 4.A.6.1.15
TC k141_244200 k141_244200_12 13665 14576 + 4.A.6.1.15
Gene ID: k141_244200_2
Type: TC
Location: 735 - 2600 (+)
Gene ID: k141_244200_3
Type: pfam
Location: 2674 - 3540 (+)
Gene ID: k141_244200_4
Type: CAZyme
Location: 3542 - 4975 (+)
Gene ID: k141_244200_5
Type: CAZyme
Location: 5083 - 5934 (+)
Gene ID: k141_244200_6
Type: TC
Location: 5927 - 6634 (+)
Gene ID: k141_244200_7
Type: TC
Location: 6785 - 8014 (+)
Gene ID: k141_244200_8
Type: TF
Location: 8221 - 11031 (+)
Gene ID: k141_244200_9
Type: TC
Location: 11181 - 11675 (+)
Gene ID: k141_244200_10
Type: TC
Location: 11774 - 12814 (+)
Gene ID: k141_244200_11
Type: TC
Location: 12840 - 13640 (+)
Gene ID: k141_244200_12
Type: TC
Location: 13665 - 14576 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota
→
Class
Bacilli
→
Order
Lactobacillales
→
Family
Vagococcaceae
→
Genus
Vagococcus_A
→
Species
Vagococcus_A lutrae

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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