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Cluster: CGMR097589_CGC5

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_77828 k141_77828_42 45769 46872 - 3.A.1.1.20
pfam k141_77828 k141_77828_43 47027 47434 + MGS
TC k141_77828 k141_77828_44 47629 48153 + 3.A.1.26.10
pfam k141_77828 k141_77828_45 48307 49311 + N6_Mtase
pfam k141_77828 k141_77828_46 49325 50506 + Acetate_kinase
TC k141_77828 k141_77828_47 50644 51594 + 3.A.1.14.21
TC k141_77828 k141_77828_48 51587 52555 + 3.A.1.14.8
TC k141_77828 k141_77828_49 52556 53314 + 3.A.1.14.7
STP k141_77828 k141_77828_50 53325 54263 + Peripla_BP_2
STP k141_77828 k141_77828_51 54382 54957 + Sigma70_ECF | Sigma70_r2
CAZyme k141_77828 k141_77828_52 55106 56458 + GH18
Gene ID: k141_77828_42
Type: TC
Location: 45769 - 46872 (-)
Gene ID: k141_77828_43
Type: pfam
Location: 47027 - 47434 (+)
Gene ID: k141_77828_44
Type: TC
Location: 47629 - 48153 (+)
Gene ID: k141_77828_45
Type: pfam
Location: 48307 - 49311 (+)
Gene ID: k141_77828_46
Type: pfam
Location: 49325 - 50506 (+)
Gene ID: k141_77828_47
Type: TC
Location: 50644 - 51594 (+)
Gene ID: k141_77828_48
Type: TC
Location: 51587 - 52555 (+)
Gene ID: k141_77828_49
Type: TC
Location: 52556 - 53314 (+)
Gene ID: k141_77828_50
Type: STP
Location: 53325 - 54263 (+)
Gene ID: k141_77828_51
Type: STP
Location: 54382 - 54957 (+)
Gene ID: k141_77828_52
Type: CAZyme
Location: 55106 - 56458 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota
→
Class
Bacilli
→
Order
Lactobacillales
→
Family
Vagococcaceae
→
Genus
Vagococcus_A
→
Species
Vagococcus_A lutrae

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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