Cluster: CGMR097589_CGC24
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate: alpha-glucan
- Genome ID: CGMR097589
- CGC Family ID: CGCFAM_00174
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_86166 | k141_86166_2 | 914 | 2200 | - | GH32 |
| TC | k141_86166 | k141_86166_3 | 2187 | 3578 | - | 4.A.1.2.1 |
| TF | k141_86166 | k141_86166_4 | 3657 | 4646 | - | LacI |
| pfam | k141_86166 | k141_86166_5 | 4797 | 5405 | - | Flavin_Reduct |
| TC | k141_86166 | k141_86166_6 | 5467 | 6897 | - | 4.A.1.2.6 |
| TC | k141_86166 | k141_86166_7 | 7047 | 8372 | - | 2.A.40.3.1 |
Gene ID: k141_86166_2
Type: CAZyme
Location: 914 - 2200 (-)
Type: CAZyme
Location: 914 - 2200 (-)
Gene ID: k141_86166_3
Type: TC
Location: 2187 - 3578 (-)
Type: TC
Location: 2187 - 3578 (-)
Gene ID: k141_86166_4
Type: TF
Location: 3657 - 4646 (-)
Type: TF
Location: 3657 - 4646 (-)
Gene ID: k141_86166_5
Type: pfam
Location: 4797 - 5405 (-)
Type: pfam
Location: 4797 - 5405 (-)
Gene ID: k141_86166_6
Type: TC
Location: 5467 - 6897 (-)
Type: TC
Location: 5467 - 6897 (-)
Gene ID: k141_86166_7
Type: TC
Location: 7047 - 8372 (-)
Type: TC
Location: 7047 - 8372 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Vagococcaceae
Genus
Vagococcus_A
Species
Vagococcus_A lutrae
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.