Cluster: CGMR097589_CGC23
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate: alpha-glucan
- Genome ID: CGMR097589
- CGC Family ID: CGCFAM_00160
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_16288 | k141_16288_1 | 3 | 890 | - | 9.B.74.1.1 |
| TF | k141_16288 | k141_16288_2 | 906 | 1379 | - | Rrf2 |
| TF | k141_16288 | k141_16288_3 | 1527 | 2237 | + | GntR |
| CAZyme | k141_16288 | k141_16288_4 | 2307 | 3968 | - | GH13_29 |
| TC | k141_16288 | k141_16288_5 | 3986 | 5413 | - | 4.A.1.2.13 |
| NULL(UNKNOWN) | k141_16288 | k141_16288_6 | 5599 | 6546 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | k141_16288 | k141_16288_7 | 6486 | 8099 | + | 3.A.1.32.2 |
Gene ID: k141_16288_1
Type: TC
Location: 3 - 890 (-)
Type: TC
Location: 3 - 890 (-)
Gene ID: k141_16288_2
Type: TF
Location: 906 - 1379 (-)
Type: TF
Location: 906 - 1379 (-)
Gene ID: k141_16288_3
Type: TF
Location: 1527 - 2237 (+)
Type: TF
Location: 1527 - 2237 (+)
Gene ID: k141_16288_4
Type: CAZyme
Location: 2307 - 3968 (-)
Type: CAZyme
Location: 2307 - 3968 (-)
Gene ID: k141_16288_5
Type: TC
Location: 3986 - 5413 (-)
Type: TC
Location: 3986 - 5413 (-)
Gene ID: k141_16288_6
Type:
Location: 5599 - 6546 (+)
Type:
Location: 5599 - 6546 (+)
Gene ID: k141_16288_7
Type: TC
Location: 6486 - 8099 (+)
Type: TC
Location: 6486 - 8099 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Vagococcaceae
Genus
Vagococcus_A
Species
Vagococcus_A lutrae
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.