Cluster: CGMR097589_CGC17
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: CGMR097589
- CGC Family ID: CGCFAM_00488
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_63240 | k141_63240_116 | 111861 | 113495 | - | 3.A.1.1.10 |
| TC | k141_63240 | k141_63240_117 | 113527 | 114447 | - | 3.A.1.1.10 |
| TC | k141_63240 | k141_63240_118 | 114460 | 115413 | - | 3.A.1.1.10 |
| pfam | k141_63240 | k141_63240_119 | 115546 | 116013 | - | Alpha_L_fucos |
| CAZyme | k141_63240 | k141_63240_120 | 116111 | 116896 | - | GH29 |
| CAZyme | k141_63240 | k141_63240_121 | 117053 | 118951 | + | GH20 |
Gene ID: k141_63240_116
Type: TC
Location: 111861 - 113495 (-)
Type: TC
Location: 111861 - 113495 (-)
Gene ID: k141_63240_117
Type: TC
Location: 113527 - 114447 (-)
Type: TC
Location: 113527 - 114447 (-)
Gene ID: k141_63240_118
Type: TC
Location: 114460 - 115413 (-)
Type: TC
Location: 114460 - 115413 (-)
Gene ID: k141_63240_119
Type: pfam
Location: 115546 - 116013 (-)
Type: pfam
Location: 115546 - 116013 (-)
Gene ID: k141_63240_120
Type: CAZyme
Location: 116111 - 116896 (-)
Type: CAZyme
Location: 116111 - 116896 (-)
Gene ID: k141_63240_121
Type: CAZyme
Location: 117053 - 118951 (+)
Type: CAZyme
Location: 117053 - 118951 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Vagococcaceae
Genus
Vagococcus_A
Species
Vagococcus_A lutrae
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.