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Cluster: CGMR097589_CGC13

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_2268 k141_2268_33 29264 30226 + 2.A.85.5.1
NULL(UNKNOWN) k141_2268 k141_2268_34 30279 30830 + NULL(UNKNOWN)
[View Structural Homologs]
peptidase k141_2268 k141_2268_35 30838 31671 + M15.UPB
CAZyme k141_2268 k141_2268_36 31613 32254 + GH73
pfam k141_2268 k141_2268_37 32283 33407 + ATP-grasp | RS_preATP-grasp-like
TF k141_2268 k141_2268_38 33420 34100 + GntR
TC k141_2268 k141_2268_39 34101 35024 + 8.A.5.1.7
pfam k141_2268 k141_2268_40 35037 35696 - 3Beta_HSD | Epimerase | Sacchrp_dh_NADP | NAD_binding_10
TC k141_2268 k141_2268_41 35822 37183 + 2.A.38.4.1
Gene ID: k141_2268_33
Type: TC
Location: 29264 - 30226 (+)
Gene ID: k141_2268_34
Type:
Location: 30279 - 30830 (+)
Gene ID: k141_2268_35
Type: peptidase
Location: 30838 - 31671 (+)
Gene ID: k141_2268_36
Type: CAZyme
Location: 31613 - 32254 (+)
Gene ID: k141_2268_37
Type: pfam
Location: 32283 - 33407 (+)
Gene ID: k141_2268_38
Type: TF
Location: 33420 - 34100 (+)
Gene ID: k141_2268_39
Type: TC
Location: 34101 - 35024 (+)
Gene ID: k141_2268_40
Type: pfam
Location: 35037 - 35696 (-)
Gene ID: k141_2268_41
Type: TC
Location: 35822 - 37183 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota
→
Class
Bacilli
→
Order
Lactobacillales
→
Family
Vagococcaceae
→
Genus
Vagococcus_A
→
Species
Vagococcus_A lutrae

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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