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Cluster: CGMR097336_CGC5

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_168261 k141_168261_3 643 2130 - 2.A.1.3.25
STP k141_168261 k141_168261_4 2272 3015 - TetR_C | TetR_N
pfam k141_168261 k141_168261_5 3067 4056 - HAAS
TC k141_168261 k141_168261_6 4141 5034 - 3.A.1.1.2
TC k141_168261 k141_168261_7 5034 6629 - 3.A.1.1.1
TC k141_168261 k141_168261_8 6759 8021 - 3.A.1.1.22
CAZyme k141_168261 k141_168261_9 8276 9967 + GH13_30
TF k141_168261 k141_168261_10 10080 11093 + LacI
TC k141_168261 k141_168261_11 11209 12585 - 2.A.1.6.10
Gene ID: k141_168261_3
Type: TC
Location: 643 - 2130 (-)
Gene ID: k141_168261_4
Type: STP
Location: 2272 - 3015 (-)
Gene ID: k141_168261_5
Type: pfam
Location: 3067 - 4056 (-)
Gene ID: k141_168261_6
Type: TC
Location: 4141 - 5034 (-)
Gene ID: k141_168261_7
Type: TC
Location: 5034 - 6629 (-)
Gene ID: k141_168261_8
Type: TC
Location: 6759 - 8021 (-)
Gene ID: k141_168261_9
Type: CAZyme
Location: 8276 - 9967 (+)
Gene ID: k141_168261_10
Type: TF
Location: 10080 - 11093 (+)
Gene ID: k141_168261_11
Type: TC
Location: 11209 - 12585 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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