Cluster: CGMR097263_CGC23
🧬 Cluster Details
- Gene Count: 15
- CAZyme Count: 8
- Substrate: beta-mannan/beta-glucan
- Genome ID: CGMR097263
- CGC Family ID: CGCFAM_00577
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_1301 | k141_1301_61 | 79549 | 82737 | + | 1.B.14.6.1 |
| pfam | k141_1301 | k141_1301_62 | 82749 | 84443 | + | SusD_RagB | SusD-like_3 |
| NULL(UNKNOWN) | k141_1301 | k141_1301_63 | 84460 | 85296 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | k141_1301 | k141_1301_64 | 85392 | 86366 | + | GH5_2 |
| CAZyme | k141_1301 | k141_1301_65 | 86359 | 88116 | + | CE7 |
| CAZyme | k141_1301 | k141_1301_66 | 88126 | 89310 | + | GH130_1 |
| TC | k141_1301 | k141_1301_67 | 89344 | 90726 | + | 2.A.2.3.6 |
| pfam | k141_1301 | k141_1301_68 | 90723 | 91889 | + | GlcNAc_2-epim |
| CAZyme | k141_1301 | k141_1301_69 | 91905 | 94229 | + | GH3 |
| CAZyme | k141_1301 | k141_1301_70 | 94233 | 95342 | + | GH26 |
| CAZyme | k141_1301 | k141_1301_71 | 95329 | 97347 | + | GH97 |
| CAZyme | k141_1301 | k141_1301_72 | 97350 | 98636 | + | GH5_7 |
| CAZyme | k141_1301 | k141_1301_73 | 98686 | 101520 | + | GH2 |
| TC | k141_1301 | k141_1301_74 | 101799 | 103145 | - | 8.A.46.1.5 |
| TC | k141_1301 | k141_1301_75 | 103157 | 106456 | - | 1.B.14.6.1 |
Gene ID: k141_1301_61
Type: TC
Location: 79549 - 82737 (+)
Type: TC
Location: 79549 - 82737 (+)
Gene ID: k141_1301_62
Type: pfam
Location: 82749 - 84443 (+)
Type: pfam
Location: 82749 - 84443 (+)
Gene ID: k141_1301_63
Type:
Location: 84460 - 85296 (+)
Type:
Location: 84460 - 85296 (+)
Gene ID: k141_1301_64
Type: CAZyme
Location: 85392 - 86366 (+)
Type: CAZyme
Location: 85392 - 86366 (+)
Gene ID: k141_1301_65
Type: CAZyme
Location: 86359 - 88116 (+)
Type: CAZyme
Location: 86359 - 88116 (+)
Gene ID: k141_1301_66
Type: CAZyme
Location: 88126 - 89310 (+)
Type: CAZyme
Location: 88126 - 89310 (+)
Gene ID: k141_1301_67
Type: TC
Location: 89344 - 90726 (+)
Type: TC
Location: 89344 - 90726 (+)
Gene ID: k141_1301_68
Type: pfam
Location: 90723 - 91889 (+)
Type: pfam
Location: 90723 - 91889 (+)
Gene ID: k141_1301_69
Type: CAZyme
Location: 91905 - 94229 (+)
Type: CAZyme
Location: 91905 - 94229 (+)
Gene ID: k141_1301_70
Type: CAZyme
Location: 94233 - 95342 (+)
Type: CAZyme
Location: 94233 - 95342 (+)
Gene ID: k141_1301_71
Type: CAZyme
Location: 95329 - 97347 (+)
Type: CAZyme
Location: 95329 - 97347 (+)
Gene ID: k141_1301_72
Type: CAZyme
Location: 97350 - 98636 (+)
Type: CAZyme
Location: 97350 - 98636 (+)
Gene ID: k141_1301_73
Type: CAZyme
Location: 98686 - 101520 (+)
Type: CAZyme
Location: 98686 - 101520 (+)
Gene ID: k141_1301_74
Type: TC
Location: 101799 - 103145 (-)
Type: TC
Location: 101799 - 103145 (-)
Gene ID: k141_1301_75
Type: TC
Location: 103157 - 106456 (-)
Type: TC
Location: 103157 - 106456 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides_E
Species
Bacteroides_E sp012518235
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.