Cluster: CGMR097263_CGC14
🧬 Cluster Details
- Gene Count: 10
- CAZyme Count: 4
- Substrate: pectin/galactan/beta-glucan/xylan/beta-mannan/host glycan
- Genome ID: CGMR097263
- CGC Family ID: CGCFAM_00001
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_505295 | k141_505295_4 | 7769 | 9430 | + | 2.A.81.1.2 |
| pfam | k141_505295 | k141_505295_5 | 9464 | 11458 | + | FBPase_2 |
| pfam | k141_505295 | k141_505295_6 | 11654 | 13390 | + | DUF6377 | DUF6377 |
| TC | k141_505295 | k141_505295_7 | 13579 | 16806 | + | 1.B.14.6.1 |
| pfam | k141_505295 | k141_505295_8 | 16823 | 18355 | + | SusD_RagB | SusD-like_3 |
| pfam | k141_505295 | k141_505295_9 | 18378 | 19880 | + | PKD | PKD_4 |
| CAZyme | k141_505295 | k141_505295_10 | 20072 | 21439 | + | GH16_3 |
| CAZyme | k141_505295 | k141_505295_11 | 21444 | 23702 | + | GH3 |
| CAZyme | k141_505295 | k141_505295_12 | 23716 | 24960 | + | GH5_46 |
| CAZyme | k141_505295 | k141_505295_13 | 25078 | 27300 | + | GH3 |
Gene ID: k141_505295_4
Type: TC
Location: 7769 - 9430 (+)
Type: TC
Location: 7769 - 9430 (+)
Gene ID: k141_505295_5
Type: pfam
Location: 9464 - 11458 (+)
Type: pfam
Location: 9464 - 11458 (+)
Gene ID: k141_505295_6
Type: pfam
Location: 11654 - 13390 (+)
Type: pfam
Location: 11654 - 13390 (+)
Gene ID: k141_505295_7
Type: TC
Location: 13579 - 16806 (+)
Type: TC
Location: 13579 - 16806 (+)
Gene ID: k141_505295_8
Type: pfam
Location: 16823 - 18355 (+)
Type: pfam
Location: 16823 - 18355 (+)
Gene ID: k141_505295_9
Type: pfam
Location: 18378 - 19880 (+)
Type: pfam
Location: 18378 - 19880 (+)
Gene ID: k141_505295_10
Type: CAZyme
Location: 20072 - 21439 (+)
Type: CAZyme
Location: 20072 - 21439 (+)
Gene ID: k141_505295_11
Type: CAZyme
Location: 21444 - 23702 (+)
Type: CAZyme
Location: 21444 - 23702 (+)
Gene ID: k141_505295_12
Type: CAZyme
Location: 23716 - 24960 (+)
Type: CAZyme
Location: 23716 - 24960 (+)
Gene ID: k141_505295_13
Type: CAZyme
Location: 25078 - 27300 (+)
Type: CAZyme
Location: 25078 - 27300 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides_E
Species
Bacteroides_E sp012518235
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.