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Cluster: CGMR097057_CGC11

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_128029 k141_128029_2 407 1525 - 9.B.10.1.1
TC k141_128029 k141_128029_3 1608 2975 - 2.A.25.1.3
TF k141_128029 k141_128029_4 3084 3623 - SpoVT_AbrB
CAZyme k141_128029 k141_128029_5 4515 5468 - GT2
Gene ID: k141_128029_2
Type: TC
Location: 407 - 1525 (-)
Gene ID: k141_128029_3
Type: TC
Location: 1608 - 2975 (-)
Gene ID: k141_128029_4
Type: TF
Location: 3084 - 3623 (-)
Gene ID: k141_128029_5
Type: CAZyme
Location: 4515 - 5468 (-)

Taxonomic Lineage

Domain
Bacteria

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_128029_4 vegetarian > omnivore 1.24496 0.03201

🧭 Explore Read Mapping of CGC

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