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Cluster: CGMR097047_CGC13

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_25581 k141_25581_18 15466 18519 + GH23
TC k141_25581 k141_25581_19 18545 20389 + 3.A.1.5.21
TC k141_25581 k141_25581_20 20427 21494 + 3.A.1.5.24
TC k141_25581 k141_25581_21 21494 22507 + 3.A.1.5.21
TC k141_25581 k141_25581_22 22482 24077 + 3.A.1.5.21
pfam k141_25581 k141_25581_23 24201 25445 + Oxidored_FMN
NULL(UNKNOWN) k141_25581 k141_25581_24 25903 26097 - NULL(UNKNOWN)
[View Structural Homologs]
TC k141_25581 k141_25581_25 26127 27545 - 2.A.3.1.10
pfam k141_25581 k141_25581_26 28006 28653 - RNase_T | Rv2179c-like
peptidase k141_25581 k141_25581_27 28650 29684 - M38.A02
TC k141_25581 k141_25581_28 29833 31092 + 9.B.34.1.3
pfam k141_25581 k141_25581_29 31154 32497 - Arginosuc_synth | Arginosuc_syn_C
TC k141_25581 k141_25581_30 33081 34748 + 2.A.14.1.1
Gene ID: k141_25581_18
Type: CAZyme
Location: 15466 - 18519 (+)
Gene ID: k141_25581_19
Type: TC
Location: 18545 - 20389 (+)
Gene ID: k141_25581_20
Type: TC
Location: 20427 - 21494 (+)
Gene ID: k141_25581_21
Type: TC
Location: 21494 - 22507 (+)
Gene ID: k141_25581_22
Type: TC
Location: 22482 - 24077 (+)
Gene ID: k141_25581_23
Type: pfam
Location: 24201 - 25445 (+)
Gene ID: k141_25581_24
Type:
Location: 25903 - 26097 (-)
Gene ID: k141_25581_25
Type: TC
Location: 26127 - 27545 (-)
Gene ID: k141_25581_26
Type: pfam
Location: 28006 - 28653 (-)
Gene ID: k141_25581_27
Type: peptidase
Location: 28650 - 29684 (-)
Gene ID: k141_25581_28
Type: TC
Location: 29833 - 31092 (+)
Gene ID: k141_25581_29
Type: pfam
Location: 31154 - 32497 (-)
Gene ID: k141_25581_30
Type: TC
Location: 33081 - 34748 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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