Cluster: CGMR097009_CGC27
🧬 Cluster Details
- Gene Count: 16
- CAZyme Count: 3
- Substrate:
- Genome ID: CGMR097009
- CGC Family ID: CGCFAM_05337
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_78666 | k141_78666_127 | 132714 | 133127 | + | 2.A.66.1.28 |
| TF | k141_78666 | k141_78666_128 | 133183 | 133896 | - | GntR |
| CAZyme | k141_78666 | k141_78666_129 | 134035 | 135498 | - | GH1 |
| CAZyme | k141_78666 | k141_78666_130 | 135565 | 136995 | - | GH1 |
| pfam | k141_78666 | k141_78666_131 | 137016 | 137843 | - | S6PP | Hydrolase_3 |
| CAZyme | k141_78666 | k141_78666_132 | 137854 | 139239 | - | GH4 |
| TF | k141_78666 | k141_78666_133 | 139487 | 140404 | + | HTH_6 |
| TC | k141_78666 | k141_78666_134 | 140463 | 142361 | - | 4.A.1.2.6 |
| pfam | k141_78666 | k141_78666_135 | 142428 | 143267 | - | PRD | PRD | CAT_RBD |
| TC | k141_78666 | k141_78666_136 | 143693 | 145477 | - | 3.A.1.106.8 |
| TC | k141_78666 | k141_78666_137 | 145480 | 147228 | - | 3.A.1.106.8 |
| pfam | k141_78666 | k141_78666_138 | 147339 | 147575 | - | UPF0154 |
| pfam | k141_78666 | k141_78666_139 | 147710 | 148507 | - | ABC2_membrane_2 | ABC2_membrane_4 |
| TC | k141_78666 | k141_78666_140 | 148509 | 149426 | - | 3.A.1.124.3 |
| NULL(UNKNOWN) | k141_78666 | k141_78666_141 | 149419 | 150165 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | k141_78666 | k141_78666_142 | 150155 | 150874 | - | 3.A.1.132.6 |
Gene ID: k141_78666_127
Type: TC
Location: 132714 - 133127 (+)
Type: TC
Location: 132714 - 133127 (+)
Gene ID: k141_78666_128
Type: TF
Location: 133183 - 133896 (-)
Type: TF
Location: 133183 - 133896 (-)
Gene ID: k141_78666_129
Type: CAZyme
Location: 134035 - 135498 (-)
Type: CAZyme
Location: 134035 - 135498 (-)
Gene ID: k141_78666_130
Type: CAZyme
Location: 135565 - 136995 (-)
Type: CAZyme
Location: 135565 - 136995 (-)
Gene ID: k141_78666_131
Type: pfam
Location: 137016 - 137843 (-)
Type: pfam
Location: 137016 - 137843 (-)
Gene ID: k141_78666_132
Type: CAZyme
Location: 137854 - 139239 (-)
Type: CAZyme
Location: 137854 - 139239 (-)
Gene ID: k141_78666_133
Type: TF
Location: 139487 - 140404 (+)
Type: TF
Location: 139487 - 140404 (+)
Gene ID: k141_78666_134
Type: TC
Location: 140463 - 142361 (-)
Type: TC
Location: 140463 - 142361 (-)
Gene ID: k141_78666_135
Type: pfam
Location: 142428 - 143267 (-)
Type: pfam
Location: 142428 - 143267 (-)
Gene ID: k141_78666_136
Type: TC
Location: 143693 - 145477 (-)
Type: TC
Location: 143693 - 145477 (-)
Gene ID: k141_78666_137
Type: TC
Location: 145480 - 147228 (-)
Type: TC
Location: 145480 - 147228 (-)
Gene ID: k141_78666_138
Type: pfam
Location: 147339 - 147575 (-)
Type: pfam
Location: 147339 - 147575 (-)
Gene ID: k141_78666_139
Type: pfam
Location: 147710 - 148507 (-)
Type: pfam
Location: 147710 - 148507 (-)
Gene ID: k141_78666_140
Type: TC
Location: 148509 - 149426 (-)
Type: TC
Location: 148509 - 149426 (-)
Gene ID: k141_78666_141
Type:
Location: 149419 - 150165 (-)
Type:
Location: 149419 - 150165 (-)
Gene ID: k141_78666_142
Type: TC
Location: 150155 - 150874 (-)
Type: TC
Location: 150155 - 150874 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Enterococcaceae
Genus
Enterococcus_C
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.