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Cluster: CGMR096876_CGC7

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_55834 k141_55834_7 4768 5493 - 1.B.42.1.2
TC k141_55834 k141_55834_8 5511 6041 - 1.B.42.1.2
pfam k141_55834 k141_55834_9 6013 6582 - LptC
pfam k141_55834 k141_55834_10 6569 7132 - Hydrolase | Hydrolase_3
TC k141_55834 k141_55834_11 7317 8111 + 3.A.1.27.3
TC k141_55834 k141_55834_12 8112 8885 + 3.A.1.27.3
TC k141_55834 k141_55834_13 8896 9402 + 3.A.1.27.3
TC k141_55834 k141_55834_14 9422 10027 + 3.A.1.27.3
NULL(UNKNOWN) k141_55834 k141_55834_15 10042 10287 + NULL(UNKNOWN)
[View Structural Homologs]
pfam k141_55834 k141_55834_16 10287 10847 + DarP
CAZyme k141_55834 k141_55834_17 10975 12612 - GH13_37
Gene ID: k141_55834_7
Type: TC
Location: 4768 - 5493 (-)
Gene ID: k141_55834_8
Type: TC
Location: 5511 - 6041 (-)
Gene ID: k141_55834_9
Type: pfam
Location: 6013 - 6582 (-)
Gene ID: k141_55834_10
Type: pfam
Location: 6569 - 7132 (-)
Gene ID: k141_55834_11
Type: TC
Location: 7317 - 8111 (+)
Gene ID: k141_55834_12
Type: TC
Location: 8112 - 8885 (+)
Gene ID: k141_55834_13
Type: TC
Location: 8896 - 9402 (+)
Gene ID: k141_55834_14
Type: TC
Location: 9422 - 10027 (+)
Gene ID: k141_55834_15
Type:
Location: 10042 - 10287 (+)
Gene ID: k141_55834_16
Type: pfam
Location: 10287 - 10847 (+)
Gene ID: k141_55834_17
Type: CAZyme
Location: 10975 - 12612 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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