Cluster: CGMR096876_CGC14
🧬 Cluster Details
- Gene Count: 8
- CAZyme Count: 3
- Substrate:
- Genome ID: CGMR096876
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_946780 | k141_946780_5 | 5959 | 6846 | + | 9.B.1.1.6 |
| pfam | k141_946780 | k141_946780_6 | 6856 | 7875 | + | NeuB | SAF |
| pfam | k141_946780 | k141_946780_7 | 7962 | 8972 | - | Gp_dh_N | Gp_dh_C |
| CAZyme | k141_946780 | k141_946780_8 | 9578 | 11776 | + | GH77 |
| CAZyme | k141_946780 | k141_946780_9 | 11814 | 14243 | + | GH13_9 |
| CAZyme | k141_946780 | k141_946780_10 | 14429 | 16591 | + | GH13_11 |
| peptidase | k141_946780 | k141_946780_11 | 16653 | 18686 | - | S49.UPA |
| TC | k141_946780 | k141_946780_12 | 18723 | 19661 | - | 8.A.21.2.1 |
Gene ID: k141_946780_5
Type: TC
Location: 5959 - 6846 (+)
Type: TC
Location: 5959 - 6846 (+)
Gene ID: k141_946780_6
Type: pfam
Location: 6856 - 7875 (+)
Type: pfam
Location: 6856 - 7875 (+)
Gene ID: k141_946780_7
Type: pfam
Location: 7962 - 8972 (-)
Type: pfam
Location: 7962 - 8972 (-)
Gene ID: k141_946780_8
Type: CAZyme
Location: 9578 - 11776 (+)
Type: CAZyme
Location: 9578 - 11776 (+)
Gene ID: k141_946780_9
Type: CAZyme
Location: 11814 - 14243 (+)
Type: CAZyme
Location: 11814 - 14243 (+)
Gene ID: k141_946780_10
Type: CAZyme
Location: 14429 - 16591 (+)
Type: CAZyme
Location: 14429 - 16591 (+)
Gene ID: k141_946780_11
Type: peptidase
Location: 16653 - 18686 (-)
Type: peptidase
Location: 16653 - 18686 (-)
Gene ID: k141_946780_12
Type: TC
Location: 18723 - 19661 (-)
Type: TC
Location: 18723 - 19661 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Succinivibrionaceae
Genus
Succinivibrio
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.