Cluster: CGMR096876_CGC11
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR096876
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_1153411 | k141_1153411_27 | 29284 | 30366 | + | 9.B.146.1.6 |
| pfam | k141_1153411 | k141_1153411_28 | 30385 | 31716 | + | Mur_ligase_C | Mur_ligase_M | MurD-like_N |
| TC | k141_1153411 | k141_1153411_29 | 31728 | 32882 | + | 2.A.103.1.1 |
| CAZyme | k141_1153411 | k141_1153411_30 | 32872 | 33936 | + | GT28 |
Gene ID: k141_1153411_27
Type: TC
Location: 29284 - 30366 (+)
Type: TC
Location: 29284 - 30366 (+)
Gene ID: k141_1153411_28
Type: pfam
Location: 30385 - 31716 (+)
Type: pfam
Location: 30385 - 31716 (+)
Gene ID: k141_1153411_29
Type: TC
Location: 31728 - 32882 (+)
Type: TC
Location: 31728 - 32882 (+)
Gene ID: k141_1153411_30
Type: CAZyme
Location: 32872 - 33936 (+)
Type: CAZyme
Location: 32872 - 33936 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Succinivibrionaceae
Genus
Succinivibrio
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.