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Cluster: CGMR096876_CGC10

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_672853 k141_672853_34 31739 32596 - 9.B.104.1.1
pfam k141_672853 k141_672853_35 32578 33540 - 3Beta_HSD | Epimerase | Polysacc_synt_2 | GDP_Man_Dehyd
CAZyme k141_672853 k141_672853_36 33630 34688 + GT9
CAZyme k141_672853 k141_672853_37 34688 35983 + GT30
pfam k141_672853 k141_672853_38 36301 37833 + ShlB | POTRA_2
NULL(UNKNOWN) k141_672853 k141_672853_39 37849 39777 + NULL(UNKNOWN)
[View Structural Homologs]
TC k141_672853 k141_672853_40 39855 40730 - 1.A.16.1.1
pfam k141_672853 k141_672853_41 40832 41551 - RIO1 | Kdo
CAZyme k141_672853 k141_672853_42 41664 42719 + GT9
Gene ID: k141_672853_34
Type: TC
Location: 31739 - 32596 (-)
Gene ID: k141_672853_35
Type: pfam
Location: 32578 - 33540 (-)
Gene ID: k141_672853_36
Type: CAZyme
Location: 33630 - 34688 (+)
Gene ID: k141_672853_37
Type: CAZyme
Location: 34688 - 35983 (+)
Gene ID: k141_672853_38
Type: pfam
Location: 36301 - 37833 (+)
Gene ID: k141_672853_39
Type:
Location: 37849 - 39777 (+)
Gene ID: k141_672853_40
Type: TC
Location: 39855 - 40730 (-)
Gene ID: k141_672853_41
Type: pfam
Location: 40832 - 41551 (-)
Gene ID: k141_672853_42
Type: CAZyme
Location: 41664 - 42719 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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