Cluster: CGMR096733_CGC6
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR096733
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_176362 | k141_176362_49 | 55545 | 55883 | - | 4.A.3.1.2 |
| TF | k141_176362 | k141_176362_50 | 56098 | 57102 | - | LacI |
| TC | k141_176362 | k141_176362_51 | 57460 | 59229 | + | 4.A.3.1.1 |
| CAZyme | k141_176362 | k141_176362_52 | 59296 | 60735 | + | GH1 |
Gene ID: k141_176362_49
Type: TC
Location: 55545 - 55883 (-)
Type: TC
Location: 55545 - 55883 (-)
Gene ID: k141_176362_50
Type: TF
Location: 56098 - 57102 (-)
Type: TF
Location: 56098 - 57102 (-)
Gene ID: k141_176362_51
Type: TC
Location: 57460 - 59229 (+)
Type: TC
Location: 57460 - 59229 (+)
Gene ID: k141_176362_52
Type: CAZyme
Location: 59296 - 60735 (+)
Type: CAZyme
Location: 59296 - 60735 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Coriobacteriaceae
Genus
Collinsella
Species
Collinsella sp905214615
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.