Cluster: CGMR096733_CGC2
🧬 Cluster Details
- Gene Count: 8
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR096733
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_110413 | k141_110413_1 | 378 | 2054 | + | 3.A.1.5.35 |
| TC | k141_110413 | k141_110413_2 | 2212 | 3249 | + | 3.A.1.5.37 |
| TC | k141_110413 | k141_110413_3 | 3264 | 4199 | + | 3.A.1.5.11 |
| TC | k141_110413 | k141_110413_4 | 4202 | 5293 | + | 3.A.1.5.34 |
| TC | k141_110413 | k141_110413_5 | 5294 | 6322 | + | 3.A.1.5.36 |
| STP | k141_110413 | k141_110413_6 | 7064 | 9409 | + | GAF | SpoIIE |
| STP | k141_110413 | k141_110413_7 | 9488 | 10234 | + | STAS |
| CAZyme | k141_110413 | k141_110413_8 | 11164 | 12897 | + | GH13_30 |
Gene ID: k141_110413_1
Type: TC
Location: 378 - 2054 (+)
Type: TC
Location: 378 - 2054 (+)
Gene ID: k141_110413_2
Type: TC
Location: 2212 - 3249 (+)
Type: TC
Location: 2212 - 3249 (+)
Gene ID: k141_110413_3
Type: TC
Location: 3264 - 4199 (+)
Type: TC
Location: 3264 - 4199 (+)
Gene ID: k141_110413_4
Type: TC
Location: 4202 - 5293 (+)
Type: TC
Location: 4202 - 5293 (+)
Gene ID: k141_110413_5
Type: TC
Location: 5294 - 6322 (+)
Type: TC
Location: 5294 - 6322 (+)
Gene ID: k141_110413_6
Type: STP
Location: 7064 - 9409 (+)
Type: STP
Location: 7064 - 9409 (+)
Gene ID: k141_110413_7
Type: STP
Location: 9488 - 10234 (+)
Type: STP
Location: 9488 - 10234 (+)
Gene ID: k141_110413_8
Type: CAZyme
Location: 11164 - 12897 (+)
Type: CAZyme
Location: 11164 - 12897 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Coriobacteriaceae
Genus
Collinsella
Species
Collinsella sp905214615
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.