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Cluster: CGMR096733_CGC18

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_156712 k141_156712_9 13799 15175 - GH13_20
TC k141_156712 k141_156712_10 15358 16554 - 2.A.1.2.18
NULL(UNKNOWN) k141_156712 k141_156712_11 16730 17482 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme k141_156712 k141_156712_12 17648 19021 - GH4
TF k141_156712 k141_156712_13 19197 19949 + HTH_6
TC k141_156712 k141_156712_14 20012 21676 - 4.A.1.1.3
TC k141_156712 k141_156712_15 21990 24350 - 9.A.8.1.6
NULL(UNKNOWN) k141_156712 k141_156712_16 24472 24792 - NULL(UNKNOWN)
[View Structural Homologs]
TC k141_156712 k141_156712_17 25257 26720 - 2.A.3.2.3
Gene ID: k141_156712_9
Type: CAZyme
Location: 13799 - 15175 (-)
Gene ID: k141_156712_10
Type: TC
Location: 15358 - 16554 (-)
Gene ID: k141_156712_11
Type:
Location: 16730 - 17482 (-)
Gene ID: k141_156712_12
Type: CAZyme
Location: 17648 - 19021 (-)
Gene ID: k141_156712_13
Type: TF
Location: 19197 - 19949 (+)
Gene ID: k141_156712_14
Type: TC
Location: 20012 - 21676 (-)
Gene ID: k141_156712_15
Type: TC
Location: 21990 - 24350 (-)
Gene ID: k141_156712_16
Type:
Location: 24472 - 24792 (-)
Gene ID: k141_156712_17
Type: TC
Location: 25257 - 26720 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_156712_11 vegan > omnivore 1.80475 0.02893
k141_156712_12 vegan > omnivore 1.52448 0.02893
k141_156712_17 vegan > omnivore 1.52843 0.02893

🧭 Explore Read Mapping of CGC

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