Cluster: CGMR096720_CGC4
🧬 Cluster Details
- Gene Count: 12
- CAZyme Count: 5
- Substrate:
- Genome ID: CGMR096720
- CGC Family ID: CGCFAM_00058
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_282350 | k141_282350_4 | 5871 | 9290 | - | PL35 |
| NULL(UNKNOWN) | k141_282350 | k141_282350_5 | 9310 | 11928 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | k141_282350 | k141_282350_6 | 11941 | 16161 | - | PL35 |
| NULL(UNKNOWN) | k141_282350 | k141_282350_7 | 16166 | 18775 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | k141_282350 | k141_282350_8 | 18784 | 20337 | - | SLH | SLH | SLH |
| TC | k141_282350 | k141_282350_9 | 20494 | 21468 | - | 3.A.1.1.10 |
| TC | k141_282350 | k141_282350_10 | 21545 | 22432 | - | 3.A.1.1.29 |
| CAZyme | k141_282350 | k141_282350_11 | 22483 | 26439 | - | CE12 |
| CAZyme | k141_282350 | k141_282350_12 | 26487 | 27602 | - | GH105 |
| TF | k141_282350 | k141_282350_13 | 27820 | 30036 | + | HTH_AraC |
| TC | k141_282350 | k141_282350_14 | 30315 | 31904 | + | 3.A.1.1.10 |
| CAZyme | k141_282350 | k141_282350_15 | 32053 | 33960 | - | GH5_19 |
Gene ID: k141_282350_4
Type: CAZyme
Location: 5871 - 9290 (-)
Type: CAZyme
Location: 5871 - 9290 (-)
Gene ID: k141_282350_5
Type:
Location: 9310 - 11928 (-)
Type:
Location: 9310 - 11928 (-)
Gene ID: k141_282350_6
Type: CAZyme
Location: 11941 - 16161 (-)
Type: CAZyme
Location: 11941 - 16161 (-)
Gene ID: k141_282350_7
Type:
Location: 16166 - 18775 (-)
Type:
Location: 16166 - 18775 (-)
Gene ID: k141_282350_8
Type: pfam
Location: 18784 - 20337 (-)
Type: pfam
Location: 18784 - 20337 (-)
Gene ID: k141_282350_9
Type: TC
Location: 20494 - 21468 (-)
Type: TC
Location: 20494 - 21468 (-)
Gene ID: k141_282350_10
Type: TC
Location: 21545 - 22432 (-)
Type: TC
Location: 21545 - 22432 (-)
Gene ID: k141_282350_11
Type: CAZyme
Location: 22483 - 26439 (-)
Type: CAZyme
Location: 22483 - 26439 (-)
Gene ID: k141_282350_12
Type: CAZyme
Location: 26487 - 27602 (-)
Type: CAZyme
Location: 26487 - 27602 (-)
Gene ID: k141_282350_13
Type: TF
Location: 27820 - 30036 (+)
Type: TF
Location: 27820 - 30036 (+)
Gene ID: k141_282350_14
Type: TC
Location: 30315 - 31904 (+)
Type: TC
Location: 30315 - 31904 (+)
Gene ID: k141_282350_15
Type: CAZyme
Location: 32053 - 33960 (-)
Type: CAZyme
Location: 32053 - 33960 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
UMGS1810
Family
UMGS1810
Genus
Qingrenia
Species
Qingrenia yutianensis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.