dbCAN Logo

Cluster: CGMR096720_CGC12

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_316960 k141_316960_38 46577 47416 + GH16
TF k141_316960 k141_316960_39 47489 48301 - HTH_AraC | HTH_AraC
TC k141_316960 k141_316960_40 48349 50115 - 8.A.59.2.1
TF k141_316960 k141_316960_41 50121 51560 - HTH_AraC
TC k141_316960 k141_316960_42 51728 52687 + 3.A.1.1.9
TC k141_316960 k141_316960_43 52709 53599 + 3.A.1.1.29
pfam k141_316960 k141_316960_44 53703 55142 + DUF3502 | SBP_bac_8
pfam k141_316960 k141_316960_45 55195 56727 + Big_5
CAZyme k141_316960 k141_316960_46 56773 60621 + GH141
CAZyme k141_316960 k141_316960_47 60659 64384 + GH141
Gene ID: k141_316960_38
Type: CAZyme
Location: 46577 - 47416 (+)
Gene ID: k141_316960_39
Type: TF
Location: 47489 - 48301 (-)
Gene ID: k141_316960_40
Type: TC
Location: 48349 - 50115 (-)
Gene ID: k141_316960_41
Type: TF
Location: 50121 - 51560 (-)
Gene ID: k141_316960_42
Type: TC
Location: 51728 - 52687 (+)
Gene ID: k141_316960_43
Type: TC
Location: 52709 - 53599 (+)
Gene ID: k141_316960_44
Type: pfam
Location: 53703 - 55142 (+)
Gene ID: k141_316960_45
Type: pfam
Location: 55195 - 56727 (+)
Gene ID: k141_316960_46
Type: CAZyme
Location: 56773 - 60621 (+)
Gene ID: k141_316960_47
Type: CAZyme
Location: 60659 - 64384 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota_A
→
Class
Clostridia
→
Order
UMGS1810
→
Family
UMGS1810
→
Genus
Qingrenia
→
Species
Qingrenia yutianensis

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List