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Cluster: CGMR096409_CGC10

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_184259 k141_184259_46 43133 44155 - GT2
TC k141_184259 k141_184259_47 44372 45202 - 3.A.1.3.27
TC k141_184259 k141_184259_48 45337 46674 - 2.A.66.1.32
pfam k141_184259 k141_184259_49 46803 47057 - DUF5348
STP k141_184259 k141_184259_50 47284 48450 - Aminotran_1_2
CAZyme k141_184259 k141_184259_51 48434 49828 - AA4
TC k141_184259 k141_184259_52 49897 50772 - 3.A.1.24.5
pfam k141_184259 k141_184259_53 50807 51766 - Ldh_1_N | Ldh_1_C
TC k141_184259 k141_184259_54 51781 52461 - 3.A.1.24.5
TC k141_184259 k141_184259_55 52458 53495 - 3.A.1.24.3
Gene ID: k141_184259_46
Type: CAZyme
Location: 43133 - 44155 (-)
Gene ID: k141_184259_47
Type: TC
Location: 44372 - 45202 (-)
Gene ID: k141_184259_48
Type: TC
Location: 45337 - 46674 (-)
Gene ID: k141_184259_49
Type: pfam
Location: 46803 - 47057 (-)
Gene ID: k141_184259_50
Type: STP
Location: 47284 - 48450 (-)
Gene ID: k141_184259_51
Type: CAZyme
Location: 48434 - 49828 (-)
Gene ID: k141_184259_52
Type: TC
Location: 49897 - 50772 (-)
Gene ID: k141_184259_53
Type: pfam
Location: 50807 - 51766 (-)
Gene ID: k141_184259_54
Type: TC
Location: 51781 - 52461 (-)
Gene ID: k141_184259_55
Type: TC
Location: 52458 - 53495 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_184259_49 vegetarian > vegan 1.36332 0.00953
k141_184259_54 vegetarian > vegan 1.71432 0.00953

🧭 Explore Read Mapping of CGC

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