Cluster: CGMR096399_CGC2
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR096399
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_271037 | k141_271037_20 | 20807 | 21877 | - | GT28 |
| TC | k141_271037 | k141_271037_21 | 21867 | 23087 | - | 2.A.103.1.1 |
| pfam | k141_271037 | k141_271037_22 | 23084 | 24424 | - | Mur_ligase_C | Mur_ligase_M | MurD-like_N |
| TC | k141_271037 | k141_271037_23 | 24430 | 25512 | - | 9.B.146.1.6 |
Gene ID: k141_271037_20
Type: CAZyme
Location: 20807 - 21877 (-)
Type: CAZyme
Location: 20807 - 21877 (-)
Gene ID: k141_271037_21
Type: TC
Location: 21867 - 23087 (-)
Type: TC
Location: 21867 - 23087 (-)
Gene ID: k141_271037_22
Type: pfam
Location: 23084 - 24424 (-)
Type: pfam
Location: 23084 - 24424 (-)
Gene ID: k141_271037_23
Type: TC
Location: 24430 - 25512 (-)
Type: TC
Location: 24430 - 25512 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Thiopseudomonas
Species
Thiopseudomonas sp012518175
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.