Cluster: CGMR096382_CGC4
🧬 Cluster Details
- Gene Count: 15
- CAZyme Count: 5
- Substrate:
- Genome ID: CGMR096382
- CGC Family ID: CGCFAM_07148
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_34642 | k141_34642_103 | 89802 | 91571 | - | 3.A.1.106.2 |
| CAZyme | k141_34642 | k141_34642_104 | 91695 | 94808 | - | GH38 |
| CAZyme | k141_34642 | k141_34642_105 | 94825 | 97464 | - | GH3 |
| CAZyme | k141_34642 | k141_34642_106 | 97482 | 100238 | - | GH38 |
| pfam | k141_34642 | k141_34642_107 | 100333 | 101889 | - | DUF3502 |
| TC | k141_34642 | k141_34642_108 | 101953 | 102837 | - | 3.A.1.1.29 |
| TC | k141_34642 | k141_34642_109 | 102858 | 103781 | - | 3.A.1.1.10 |
| TF | k141_34642 | k141_34642_110 | 104134 | 105261 | + | GntR |
| CAZyme | k141_34642 | k141_34642_111 | 105395 | 107635 | - | GH95 |
| TC | k141_34642 | k141_34642_112 | 107648 | 109426 | - | 3.A.1.106.2 |
| pfam | k141_34642 | k141_34642_113 | 109903 | 110502 | - | Hydrolase | HAD |
| CAZyme | k141_34642 | k141_34642_114 | 110551 | 111867 | - | GH3 |
| TC | k141_34642 | k141_34642_115 | 111892 | 113280 | - | 3.A.1.122.7 |
| NULL(UNKNOWN) | k141_34642 | k141_34642_116 | 113286 | 114998 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | k141_34642 | k141_34642_117 | 114982 | 115788 | - | 3.A.1.122.14 |
Gene ID: k141_34642_103
Type: TC
Location: 89802 - 91571 (-)
Type: TC
Location: 89802 - 91571 (-)
Gene ID: k141_34642_104
Type: CAZyme
Location: 91695 - 94808 (-)
Type: CAZyme
Location: 91695 - 94808 (-)
Gene ID: k141_34642_105
Type: CAZyme
Location: 94825 - 97464 (-)
Type: CAZyme
Location: 94825 - 97464 (-)
Gene ID: k141_34642_106
Type: CAZyme
Location: 97482 - 100238 (-)
Type: CAZyme
Location: 97482 - 100238 (-)
Gene ID: k141_34642_107
Type: pfam
Location: 100333 - 101889 (-)
Type: pfam
Location: 100333 - 101889 (-)
Gene ID: k141_34642_108
Type: TC
Location: 101953 - 102837 (-)
Type: TC
Location: 101953 - 102837 (-)
Gene ID: k141_34642_109
Type: TC
Location: 102858 - 103781 (-)
Type: TC
Location: 102858 - 103781 (-)
Gene ID: k141_34642_110
Type: TF
Location: 104134 - 105261 (+)
Type: TF
Location: 104134 - 105261 (+)
Gene ID: k141_34642_111
Type: CAZyme
Location: 105395 - 107635 (-)
Type: CAZyme
Location: 105395 - 107635 (-)
Gene ID: k141_34642_112
Type: TC
Location: 107648 - 109426 (-)
Type: TC
Location: 107648 - 109426 (-)
Gene ID: k141_34642_113
Type: pfam
Location: 109903 - 110502 (-)
Type: pfam
Location: 109903 - 110502 (-)
Gene ID: k141_34642_114
Type: CAZyme
Location: 110551 - 111867 (-)
Type: CAZyme
Location: 110551 - 111867 (-)
Gene ID: k141_34642_115
Type: TC
Location: 111892 - 113280 (-)
Type: TC
Location: 111892 - 113280 (-)
Gene ID: k141_34642_116
Type:
Location: 113286 - 114998 (-)
Type:
Location: 113286 - 114998 (-)
Gene ID: k141_34642_117
Type: TC
Location: 114982 - 115788 (-)
Type: TC
Location: 114982 - 115788 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
UMGS2037
Species
UMGS2037 sp900557385
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.