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Cluster: CGMR096382_CGC38

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_104701 k141_104701_42 44087 46489 + GH94
pfam k141_104701 k141_104701_43 46516 47934 + PGM_PMM_IV | PGM_PMM_I | PGM_PMM_II | PGM_PMM_III
TF k141_104701 k141_104701_44 48036 48797 + HTH_AraC | HTH_AraC
TC k141_104701 k141_104701_45 48766 50535 + 9.B.33.1.1
STP k141_104701 k141_104701_46 50519 51802 + SBP_bac_1
TC k141_104701 k141_104701_47 51991 52917 + 3.A.1.1.29
TC k141_104701 k141_104701_48 52941 53849 + 3.A.1.1.9
Gene ID: k141_104701_42
Type: CAZyme
Location: 44087 - 46489 (+)
Gene ID: k141_104701_43
Type: pfam
Location: 46516 - 47934 (+)
Gene ID: k141_104701_44
Type: TF
Location: 48036 - 48797 (+)
Gene ID: k141_104701_45
Type: TC
Location: 48766 - 50535 (+)
Gene ID: k141_104701_46
Type: STP
Location: 50519 - 51802 (+)
Gene ID: k141_104701_47
Type: TC
Location: 51991 - 52917 (+)
Gene ID: k141_104701_48
Type: TC
Location: 52941 - 53849 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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