Cluster: CGMR096382_CGC17
🧬 Cluster Details
- Gene Count: 14
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR096382
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_6238 | k141_6238_12 | 17055 | 18386 | - | 1.A.26.1.2 |
| pfam | k141_6238 | k141_6238_13 | 18525 | 19163 | - | UPF0029 | DUF1949 |
| CAZyme | k141_6238 | k141_6238_14 | 19362 | 22124 | + | GT51 |
| TC | k141_6238 | k141_6238_15 | 22214 | 23935 | - | 1.B.52.2.1 |
| TC | k141_6238 | k141_6238_16 | 23960 | 25174 | - | 3.A.1.2.5 |
| TC | k141_6238 | k141_6238_17 | 25185 | 26711 | - | 3.A.1.2.5 |
| TC | k141_6238 | k141_6238_18 | 26804 | 27991 | - | 3.A.1.2.26 |
| TC | k141_6238 | k141_6238_19 | 28163 | 29215 | - | 3.A.1.2.26 |
| TF | k141_6238 | k141_6238_20 | 29212 | 30822 | - | HTH_AraC | HTH_AraC |
| TC | k141_6238 | k141_6238_21 | 30834 | 32336 | - | 8.A.59.2.1 |
| pfam | k141_6238 | k141_6238_22 | 32314 | 33369 | - | Peripla_BP_4 |
| NULL(UNKNOWN) | k141_6238 | k141_6238_23 | 33500 | 34237 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | k141_6238 | k141_6238_24 | 34294 | 35496 | - | 3.A.1.122.2 |
| TC | k141_6238 | k141_6238_25 | 35489 | 36226 | - | 3.A.1.122.2 |
Gene ID: k141_6238_12
Type: TC
Location: 17055 - 18386 (-)
Type: TC
Location: 17055 - 18386 (-)
Gene ID: k141_6238_13
Type: pfam
Location: 18525 - 19163 (-)
Type: pfam
Location: 18525 - 19163 (-)
Gene ID: k141_6238_14
Type: CAZyme
Location: 19362 - 22124 (+)
Type: CAZyme
Location: 19362 - 22124 (+)
Gene ID: k141_6238_15
Type: TC
Location: 22214 - 23935 (-)
Type: TC
Location: 22214 - 23935 (-)
Gene ID: k141_6238_16
Type: TC
Location: 23960 - 25174 (-)
Type: TC
Location: 23960 - 25174 (-)
Gene ID: k141_6238_17
Type: TC
Location: 25185 - 26711 (-)
Type: TC
Location: 25185 - 26711 (-)
Gene ID: k141_6238_18
Type: TC
Location: 26804 - 27991 (-)
Type: TC
Location: 26804 - 27991 (-)
Gene ID: k141_6238_19
Type: TC
Location: 28163 - 29215 (-)
Type: TC
Location: 28163 - 29215 (-)
Gene ID: k141_6238_20
Type: TF
Location: 29212 - 30822 (-)
Type: TF
Location: 29212 - 30822 (-)
Gene ID: k141_6238_21
Type: TC
Location: 30834 - 32336 (-)
Type: TC
Location: 30834 - 32336 (-)
Gene ID: k141_6238_22
Type: pfam
Location: 32314 - 33369 (-)
Type: pfam
Location: 32314 - 33369 (-)
Gene ID: k141_6238_23
Type:
Location: 33500 - 34237 (-)
Type:
Location: 33500 - 34237 (-)
Gene ID: k141_6238_24
Type: TC
Location: 34294 - 35496 (-)
Type: TC
Location: 34294 - 35496 (-)
Gene ID: k141_6238_25
Type: TC
Location: 35489 - 36226 (-)
Type: TC
Location: 35489 - 36226 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
UMGS2037
Species
UMGS2037 sp900557385
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.