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Cluster: CGMR096159_CGC4

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_162512 k141_162512_2 603 2495 + 9.B.18.2.1
TC k141_162512 k141_162512_3 2587 3720 + 1.B.18.3.8
pfam k141_162512 k141_162512_4 3880 4326 + LMWPc
TC k141_162512 k141_162512_5 4375 6567 + 8.A.3.3.2
TC k141_162512 k141_162512_6 6887 7582 - 2.A.122.1.6
TC k141_162512 k141_162512_7 7595 7987 - 1.E.14.1.9
TF k141_162512 k141_162512_8 8125 9009 + HTH_1
CAZyme k141_162512 k141_162512_9 9544 10671 + GH179
STP k141_162512 k141_162512_10 10668 11327 + Nitroreductase
TC k141_162512 k141_162512_11 11493 12575 - 9.B.146.1.6
Gene ID: k141_162512_2
Type: TC
Location: 603 - 2495 (+)
Gene ID: k141_162512_3
Type: TC
Location: 2587 - 3720 (+)
Gene ID: k141_162512_4
Type: pfam
Location: 3880 - 4326 (+)
Gene ID: k141_162512_5
Type: TC
Location: 4375 - 6567 (+)
Gene ID: k141_162512_6
Type: TC
Location: 6887 - 7582 (-)
Gene ID: k141_162512_7
Type: TC
Location: 7595 - 7987 (-)
Gene ID: k141_162512_8
Type: TF
Location: 8125 - 9009 (+)
Gene ID: k141_162512_9
Type: CAZyme
Location: 9544 - 10671 (+)
Gene ID: k141_162512_10
Type: STP
Location: 10668 - 11327 (+)
Gene ID: k141_162512_11
Type: TC
Location: 11493 - 12575 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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