Cluster: CGMR096159_CGC21
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR096159
- CGC Family ID: CGCFAM_00896
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_84333 | k141_84333_15 | 18044 | 18475 | + | 2.A.7.2.1 |
| pfam | k141_84333 | k141_84333_16 | 18568 | 19233 | - | Hydrolase | HAD_2 |
| CAZyme | k141_84333 | k141_84333_17 | 19246 | 21504 | - | GH65 |
| TC | k141_84333 | k141_84333_18 | 21627 | 22979 | - | 2.A.2.6.2 |
| TC | k141_84333 | k141_84333_19 | 23580 | 25034 | + | 1.A.26.1.2 |
Gene ID: k141_84333_15
Type: TC
Location: 18044 - 18475 (+)
Type: TC
Location: 18044 - 18475 (+)
Gene ID: k141_84333_16
Type: pfam
Location: 18568 - 19233 (-)
Type: pfam
Location: 18568 - 19233 (-)
Gene ID: k141_84333_17
Type: CAZyme
Location: 19246 - 21504 (-)
Type: CAZyme
Location: 19246 - 21504 (-)
Gene ID: k141_84333_18
Type: TC
Location: 21627 - 22979 (-)
Type: TC
Location: 21627 - 22979 (-)
Gene ID: k141_84333_19
Type: TC
Location: 23580 - 25034 (+)
Type: TC
Location: 23580 - 25034 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Burkholderiales
Family
Neisseriaceae
Genus
Neisseria
Species
Neisseria flava
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.