Cluster: CGMR096159_CGC13
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR096159
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_200539 | k141_200539_1 | 127 | 1581 | + | 2.A.6.2.14 |
| TC | k141_200539 | k141_200539_2 | 1634 | 2842 | - | 2.A.40.1.4 |
| pfam | k141_200539 | k141_200539_3 | 4420 | 7146 | + | HemolysinCabind | HemolysinCabind | HemolysinCabind | HemolysinCabind | HemolysinCabind | HemolysinCabind | HemolysinCabind | HCBP_related |
| pfam | k141_200539 | k141_200539_4 | 7433 | 8776 | + | Aldedh |
| TC | k141_200539 | k141_200539_5 | 9122 | 9970 | - | 3.D.6.1.4 |
| pfam | k141_200539 | k141_200539_6 | 10221 | 10982 | - | Exo_endo_phos |
| CAZyme | k141_200539 | k141_200539_7 | 11147 | 12700 | - | GT2 |
Gene ID: k141_200539_1
Type: TC
Location: 127 - 1581 (+)
Type: TC
Location: 127 - 1581 (+)
Gene ID: k141_200539_2
Type: TC
Location: 1634 - 2842 (-)
Type: TC
Location: 1634 - 2842 (-)
Gene ID: k141_200539_3
Type: pfam
Location: 4420 - 7146 (+)
Type: pfam
Location: 4420 - 7146 (+)
Gene ID: k141_200539_4
Type: pfam
Location: 7433 - 8776 (+)
Type: pfam
Location: 7433 - 8776 (+)
Gene ID: k141_200539_5
Type: TC
Location: 9122 - 9970 (-)
Type: TC
Location: 9122 - 9970 (-)
Gene ID: k141_200539_6
Type: pfam
Location: 10221 - 10982 (-)
Type: pfam
Location: 10221 - 10982 (-)
Gene ID: k141_200539_7
Type: CAZyme
Location: 11147 - 12700 (-)
Type: CAZyme
Location: 11147 - 12700 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Burkholderiales
Family
Neisseriaceae
Genus
Neisseria
Species
Neisseria flava
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.