Cluster: CGMR096159_CGC1
🧬 Cluster Details
- Gene Count: 9
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR096159
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_19051 | k141_19051_2 | 1051 | 1653 | - | AA6 |
| TC | k141_19051 | k141_19051_3 | 1788 | 3020 | + | 9.B.126.2.2 |
| TC | k141_19051 | k141_19051_4 | 3115 | 4893 | + | 3.A.1.5.24 |
| peptidase | k141_19051 | k141_19051_5 | 5730 | 6653 | - | S09.UNW |
| TC | k141_19051 | k141_19051_6 | 6771 | 8879 | - | 1.B.14.1.6 |
| TC | k141_19051 | k141_19051_7 | 9047 | 10378 | - | 2.A.2.6.3 |
| TF | k141_19051 | k141_19051_8 | 10598 | 11635 | - | LacI |
| sulfatase | k141_19051 | k141_19051_9 | 11928 | 13556 | + | S1_2 |
| TC | k141_19051 | k141_19051_10 | 13649 | 14995 | - | 2.A.49.5.5 |
Gene ID: k141_19051_2
Type: CAZyme
Location: 1051 - 1653 (-)
Type: CAZyme
Location: 1051 - 1653 (-)
Gene ID: k141_19051_3
Type: TC
Location: 1788 - 3020 (+)
Type: TC
Location: 1788 - 3020 (+)
Gene ID: k141_19051_4
Type: TC
Location: 3115 - 4893 (+)
Type: TC
Location: 3115 - 4893 (+)
Gene ID: k141_19051_5
Type: peptidase
Location: 5730 - 6653 (-)
Type: peptidase
Location: 5730 - 6653 (-)
Gene ID: k141_19051_6
Type: TC
Location: 6771 - 8879 (-)
Type: TC
Location: 6771 - 8879 (-)
Gene ID: k141_19051_7
Type: TC
Location: 9047 - 10378 (-)
Type: TC
Location: 9047 - 10378 (-)
Gene ID: k141_19051_8
Type: TF
Location: 10598 - 11635 (-)
Type: TF
Location: 10598 - 11635 (-)
Gene ID: k141_19051_9
Type: sulfatase
Location: 11928 - 13556 (+)
Type: sulfatase
Location: 11928 - 13556 (+)
Gene ID: k141_19051_10
Type: TC
Location: 13649 - 14995 (-)
Type: TC
Location: 13649 - 14995 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Burkholderiales
Family
Neisseriaceae
Genus
Neisseria
Species
Neisseria flava
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.