Cluster: CGMR096112_CGC5
🧬 Cluster Details
- Gene Count: 12
- CAZyme Count: 2
- Substrate:
- Genome ID: CGMR096112
- CGC Family ID: CGCFAM_02317
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_30976 | k141_30976_166 | 176464 | 177927 | - | 4.A.1.2.7 |
| STP | k141_30976 | k141_30976_167 | 177920 | 178747 | - | SIS |
| TF | k141_30976 | k141_30976_168 | 178968 | 179804 | + | HTH_6 |
| TC | k141_30976 | k141_30976_169 | 180125 | 181828 | + | 8.A.7.1.1 |
| TC | k141_30976 | k141_30976_170 | 181923 | 182426 | + | 4.A.1.1.1 |
| TC | k141_30976 | k141_30976_171 | 182676 | 184253 | + | 4.A.1.1.3 |
| TF | k141_30976 | k141_30976_172 | 184250 | 185014 | + | HTH_6 |
| CAZyme | k141_30976 | k141_30976_173 | 185011 | 186345 | + | GH4 |
| CAZyme | k141_30976 | k141_30976_174 | 186357 | 187544 | + | CE9 |
| NULL(UNKNOWN) | k141_30976 | k141_30976_175 | 187668 | 188741 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | k141_30976 | k141_30976_176 | 188788 | 189981 | - | tRNA_SAD |
| TC | k141_30976 | k141_30976_177 | 190101 | 192530 | + | 3.A.11.1.1 |
Gene ID: k141_30976_166
Type: TC
Location: 176464 - 177927 (-)
Type: TC
Location: 176464 - 177927 (-)
Gene ID: k141_30976_167
Type: STP
Location: 177920 - 178747 (-)
Type: STP
Location: 177920 - 178747 (-)
Gene ID: k141_30976_168
Type: TF
Location: 178968 - 179804 (+)
Type: TF
Location: 178968 - 179804 (+)
Gene ID: k141_30976_169
Type: TC
Location: 180125 - 181828 (+)
Type: TC
Location: 180125 - 181828 (+)
Gene ID: k141_30976_170
Type: TC
Location: 181923 - 182426 (+)
Type: TC
Location: 181923 - 182426 (+)
Gene ID: k141_30976_171
Type: TC
Location: 182676 - 184253 (+)
Type: TC
Location: 182676 - 184253 (+)
Gene ID: k141_30976_172
Type: TF
Location: 184250 - 185014 (+)
Type: TF
Location: 184250 - 185014 (+)
Gene ID: k141_30976_173
Type: CAZyme
Location: 185011 - 186345 (+)
Type: CAZyme
Location: 185011 - 186345 (+)
Gene ID: k141_30976_174
Type: CAZyme
Location: 186357 - 187544 (+)
Type: CAZyme
Location: 186357 - 187544 (+)
Gene ID: k141_30976_175
Type:
Location: 187668 - 188741 (+)
Type:
Location: 187668 - 188741 (+)
Gene ID: k141_30976_176
Type: pfam
Location: 188788 - 189981 (-)
Type: pfam
Location: 188788 - 189981 (-)
Gene ID: k141_30976_177
Type: TC
Location: 190101 - 192530 (+)
Type: TC
Location: 190101 - 192530 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Tissierellales
Family
Tissierellaceae
Genus
JAAYTL01
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.