Cluster: CGMR096112_CGC16
🧬 Cluster Details
- Gene Count: 17
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR096112
- CGC Family ID: CGCFAM_09131
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_43832 | k141_43832_373 | 371696 | 374323 | + | 3.A.3.4.1 |
| pfam | k141_43832 | k141_43832_374 | 374429 | 374770 | + | YjdM | Zn_Ribbon_YjdM |
| TC | k141_43832 | k141_43832_375 | 374860 | 376692 | - | 3.A.1.135.5 |
| TC | k141_43832 | k141_43832_376 | 376689 | 378413 | - | 3.A.1.135.5 |
| TF | k141_43832 | k141_43832_377 | 378465 | 378893 | - | MarR |
| TC | k141_43832 | k141_43832_378 | 379277 | 380095 | - | 3.A.1.24.1 |
| TC | k141_43832 | k141_43832_379 | 380112 | 380792 | - | 3.A.1.24.6 |
| TC | k141_43832 | k141_43832_380 | 380785 | 381819 | - | 3.A.1.24.1 |
| peptidase | k141_43832 | k141_43832_381 | 381830 | 383026 | - | M20.UPD |
| TC | k141_43832 | k141_43832_382 | 384100 | 385050 | - | 3.A.1.2.13 |
| TC | k141_43832 | k141_43832_383 | 385076 | 385822 | - | 1.A.13.5.1 |
| pfam | k141_43832 | k141_43832_384 | 385871 | 386269 | - | RbsD_FucU |
| TC | k141_43832 | k141_43832_385 | 386285 | 387232 | - | 3.A.1.2.1 |
| TC | k141_43832 | k141_43832_386 | 387222 | 388727 | - | 3.A.1.2.13 |
| STP | k141_43832 | k141_43832_387 | 388740 | 389645 | - | PfkB |
| TF | k141_43832 | k141_43832_388 | 389645 | 390625 | - | LacI |
| CAZyme | k141_43832 | k141_43832_389 | 390875 | 392644 | + | GH18 |
Gene ID: k141_43832_373
Type: TC
Location: 371696 - 374323 (+)
Type: TC
Location: 371696 - 374323 (+)
Gene ID: k141_43832_374
Type: pfam
Location: 374429 - 374770 (+)
Type: pfam
Location: 374429 - 374770 (+)
Gene ID: k141_43832_375
Type: TC
Location: 374860 - 376692 (-)
Type: TC
Location: 374860 - 376692 (-)
Gene ID: k141_43832_376
Type: TC
Location: 376689 - 378413 (-)
Type: TC
Location: 376689 - 378413 (-)
Gene ID: k141_43832_377
Type: TF
Location: 378465 - 378893 (-)
Type: TF
Location: 378465 - 378893 (-)
Gene ID: k141_43832_378
Type: TC
Location: 379277 - 380095 (-)
Type: TC
Location: 379277 - 380095 (-)
Gene ID: k141_43832_379
Type: TC
Location: 380112 - 380792 (-)
Type: TC
Location: 380112 - 380792 (-)
Gene ID: k141_43832_380
Type: TC
Location: 380785 - 381819 (-)
Type: TC
Location: 380785 - 381819 (-)
Gene ID: k141_43832_381
Type: peptidase
Location: 381830 - 383026 (-)
Type: peptidase
Location: 381830 - 383026 (-)
Gene ID: k141_43832_382
Type: TC
Location: 384100 - 385050 (-)
Type: TC
Location: 384100 - 385050 (-)
Gene ID: k141_43832_383
Type: TC
Location: 385076 - 385822 (-)
Type: TC
Location: 385076 - 385822 (-)
Gene ID: k141_43832_384
Type: pfam
Location: 385871 - 386269 (-)
Type: pfam
Location: 385871 - 386269 (-)
Gene ID: k141_43832_385
Type: TC
Location: 386285 - 387232 (-)
Type: TC
Location: 386285 - 387232 (-)
Gene ID: k141_43832_386
Type: TC
Location: 387222 - 388727 (-)
Type: TC
Location: 387222 - 388727 (-)
Gene ID: k141_43832_387
Type: STP
Location: 388740 - 389645 (-)
Type: STP
Location: 388740 - 389645 (-)
Gene ID: k141_43832_388
Type: TF
Location: 389645 - 390625 (-)
Type: TF
Location: 389645 - 390625 (-)
Gene ID: k141_43832_389
Type: CAZyme
Location: 390875 - 392644 (+)
Type: CAZyme
Location: 390875 - 392644 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Tissierellales
Family
Tissierellaceae
Genus
JAAYTL01
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.